RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TMEM132CQ8N3T6 1108 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 CDC26Q8NHZ8 85 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 M1APQ8TC57 530 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 DAZLQ92904 295 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 TM4SF18Q96CE8 201 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PPP3R2Q96LZ3 170 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PELOQ9BRX2 385 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 KCNK13Q9HB14 408 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 LRTM1Q9HBL6 345 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF71Q9NQZ8 489 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 THAP1Q9NVV9 213 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 TEX10Q9NXF1 929 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 VTI1BQ9UEU0 232 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 TEKT2Q9UIF3 430 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF451Q9Y4E5 1061 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PCDHGB7Q9Y5F8 929 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PTGDR2Q9Y5Y4 395 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 BOD1L1Q8NFC6 3051 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 MYOCOSA0A1B0GUC4 107 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 A8MUI8 341 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PGRMC2O15173 223 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 FGF17O60258 216 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 DRD2P14416 443 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PRPH2P23942 346 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 MAPK1P28482 360 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ARRB2P32121 409 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC26A5P58743 744 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 RAE1P78406 368 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PLIN5Q00G26 463 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 Q0VFX4 171 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 TERF2Q15554 542 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PDCD2Q16342 344 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 UGT3A2Q3SY77 523 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ATP6AP1LQ52LC2 224 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 C6orf163Q5TEZ5 329 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ASB18Q6ZVZ8 466 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 OR4K14Q8NGD5 310 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 OR14A16Q8NHC5 309 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 DNAJB14Q8TBM8 379 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 LRRC8CQ8TDW0 803 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 C16orf78Q8WTQ4 265 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 TM9SF4Q92544 642 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ANKRD9Q96BM1 317 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 WDR77Q9BQA1 342 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 NUDT9Q9BW91 350 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 TUBB1Q9H4B7 451 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF395Q9H8N7 513 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 MMP25Q9NPA2 562 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 INTS9Q9NV88 658 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF446Q9NWS9 450 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 SIRT5Q9NXA8 310 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 DLGAP4Q9Y2H0 992 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 WBP11Q9Y2W2 641 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 POLR3HQ9Y535 204 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 PCDHA9Q9Y5H5 950 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF780BQ9Y6R6 833 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 MED13Q9UHV7 2174 aa11.31□□□□□ -0.6
CSNK1E-213ENST00000495232 C17orf105B2RV13 164 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 NPIPB8E9PQR5 432 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 LSM1O15116 133 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 IL3P08700 152 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ITGAMP11215 1152 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ALOX15P16050 662 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 NR1D1P20393 614 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 STT3AP46977 705 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 RPL38P63173 70 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 C2orf80Q0P641 193 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 CRB2Q5IJ48 1285 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 CES4AQ5XG92 561 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC48A1Q6P1K1 146 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ISLR2Q6UXK2 745 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ATG14Q6ZNE5 492 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 Q6ZSR9 355 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 HPS6Q86YV9 775 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ST13P4Q8IZP2 240 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC5A8Q8N695 610 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 KLHL29Q96CT2 875 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 TUBGCP3Q96CW5 907 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 ART5Q96L15 291 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms