RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC43A2Q8N370 569 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LRRC52Q8N7C0 313 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OR5M3Q8NGP4 307 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EDARADDQ8WWZ3 215 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 DDX17Q92841 729 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 USP7Q93009 1102 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SCRN2Q96FV2 425 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZDHHC12Q96GR4 267 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 HPDLQ96IR7 371 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 THUMPD3Q9BV44 507 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 COLEC11Q9BWP8 271 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ALX4Q9H161 411 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RPF1Q9H9Y2 349 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 BTG4Q9NY30 223 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TRPS1Q9UHF7 1281 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EVLQ9UI08 416 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TSR3Q9UJK0 312 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ENTPD4Q9Y227 616 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SHROOM3Q8TF72 1996 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C9orf170A2RU37 121 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C2orf74A8MZ97 194 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MCIDASD6RGH6 385 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 H3BM21 787 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PHYHO14832 338 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF749O43361 778 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GREM1O60565 184 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 POP4O95707 220 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TCRBP04435 133 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C1SP09871 688 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PRPS2P11908 318 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RHCEP18577 417 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CD53P19397 219 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CXCL2P19875 107 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ERVPABLB-1P60509 514 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 BDH1Q02338 343 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C1DQ13901 141 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MBTPS1Q14703 1052 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MED22Q15528 200 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CHRNA6Q15825 494 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SWSAP1Q6NVH7 229 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CD300LDQ6UXZ3 194 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GCNT7Q6ZNI0 430 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM91Q6ZNR0 172 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MOB3CQ70IA8 216 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MRGPREQ86SM8 312 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PDZD3Q86UT5 571 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 STX12Q86Y82 276 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ARHGAP12Q8IWW6 846 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PDZD9Q8IXQ8 264 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SP8Q8IXZ3 490 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OXR1Q8N573 874 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 KDF1Q8NAX2 398 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OR6K3Q8NGY3 331 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GTF3C2Q8WUA4 911 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SENP5Q96HI0 755 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TAAR1Q96RJ0 339 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CDT1Q9H211 546 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TCF7L1Q9HCS4 588 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZSCAN32Q9NX65 697 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CORO2BQ9UQ03 480 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NME7Q9Y5B8 376 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 THSD7AQ9UPZ6 1657 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 BRWD3Q6RI45 1802 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ISM1B1AKI9 464 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CDC7O00311 574 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TSC22D2O75157 780 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 IL5P05113 134 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NFICP08651 508 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PPIBP23284 216 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ARPP19P56211 112 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 HLXQ14774 488 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 P2RY14Q15391 338 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 STRIP1Q5VSL9 837 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 BHLHB9Q6PI77 547 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MOB2Q70IA6 237 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZBTB8OSQ8IWT0 167 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TP53INP2Q8IXH6 220 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FAM26EQ8N5C1 309 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OR10G2Q8NGC3 310 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 KAT2AQ92830 837 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RFT1Q96AA3 541 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RAB7BQ96AH8 199 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 VOPP1Q96AW1 172 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PHYHIPLQ96FC7 376 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LRRC46Q96FV0 321 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NARS2Q96I59 477 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF354BQ96LW1 612 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SLC6A18Q96N87 628 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MOGAT1Q96PD6 335 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FICDQ9BVA6 458 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SLC25A51Q9H1U9 297 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ANKRD19PQ9H560 264 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SPHK1Q9NYA1 384 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TAS2R13Q9NYV9 303 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 METTL1Q9UBP6 276 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ACSL6Q9UKU0 697 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EXO1Q9UQ84 846 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TDRD15B5MCY1 1934 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms