RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 A0A0J9YY10 115 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 M0QX08 132 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 TLR4O00206 839 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 NCBP2P52298 156 aaKnown RBP eCLIP15.63■□□□□ 0.092e-8■■■■■ 28.7
ATG4B-225ENST00000494465 RPL6Q02878 288 aaKnown RBP15.63■□□□□ 0.09
ATG4B-225ENST00000494465 BIRC2Q13490 618 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 MAPK11Q15759 364 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 KRT80Q6KB66 452 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 TNFAIP8L2Q6P589 184 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-225ENST00000494465 CEP68Q76N32 757 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 RNF44Q7L0R7 432 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 RBM12BQ8IXT5 1001 aaKnown RBP15.63■□□□□ 0.09
ATG4B-225ENST00000494465 SDCCAG3Q96C92 435 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 A4GALTQ9NPC4 353 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 LYARQ9NX58 379 aaKnown RBP15.63■□□□□ 0.09
ATG4B-225ENST00000494465 KCMF1Q9P0J7 381 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 PADI2Q9Y2J8 665 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 TP53BP1Q12888 1972 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-225ENST00000494465 CCDC88CQ9P219 2028 aa15.63■□□□□ 0.09
ATG4B-225ENST00000494465 EME2A4GXA9 379 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 PRAMEF25A6NGN4 478 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 H0YAE9 185 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 E2F6O75461 281 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ERAL1O75616 437 aaKnown RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 PTGER1P34995 402 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ITGA1P56199 1179 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 APOFQ13790 326 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 CEBPEQ15744 281 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ZIK1Q3SY52 487 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 RNF220Q5VTB9 566 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 CAMKK1Q8N5S9 505 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 SLC38A5Q8WUX1 472 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ZNF681Q96N22 645 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 RDH12Q96NR8 316 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 RBM4BQ9BQ04 359 aaKnown RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 RBM4Q9BWF3 364 aaKnown RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 TMEFF2Q9UIK5 374 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 LAMA1P25391 3075 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 TMEM131Q92545 1883 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 H0YGG7 62 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 H3BNH8 94 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 HMGN4O00479 90 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 VILLO15195 856 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 DNAJB6O75190 326 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 H6PDO95479 791 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 TYRP1P17643 537 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 NTSP30990 170 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 MAZP56270 477 aaKnown RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ARF3P61204 181 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-225ENST00000494465 SPDYE7PQ495Y7 208 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 HIPK1Q86Z02 1210 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 OFCC1Q8IZS5 231 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 ZCCHC10Q8TBK6 192 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 C10orf90Q96M02 699 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 BBS4Q96RK4 519 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 MBOAT4Q96T53 435 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 GABARAPL1Q9H0R8 117 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 TOR3AQ9H497 397 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 TMEM74BQ9NUR3 256 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 SPAG17Q6Q759 2223 aa15.62■□□□□ 0.09
ATG4B-225ENST00000494465 DPM1O60762 260 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ALBP02768 609 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 TFPTP0C1Z6 253 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 TNFRSF1BP20333 461 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 OOSP2Q86WS3 158 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 SLC30A8Q8IWU4 369 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 CCDC116Q8IYX3 515 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 CAMKVQ8NCB2 501 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 RAB8BQ92930 207 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 HSPA12BQ96MM6 686 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 IFT80Q9P2H3 777 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 POMT2Q9UKY4 750 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ANGPT4Q9Y264 503 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 MRPS2Q9Y399 296 aaKnown RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 K7ESF4 209 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 HCRTR1O43613 425 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 PGM3O95394 542 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 TFAP2AP05549 437 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 C8orf89P0DMQ9 161 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ALPPL2P10696 532 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 BCKDHBP21953 392 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 TP53BP2Q13625 1128 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 RUNX2Q13950 521 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 LAPTM4AQ15012 233 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 SUZ12Q15022 739 aaKnown RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ELOCQ15369 112 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 DEFB134Q4QY38 66 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 REEP3Q6NUK4 255 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 TMEM64Q6YI46 380 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 PATL1Q86TB9 770 aaKnown RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 APLFQ8IW19 511 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ZFP28Q8NHY6 868 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 SERINC2Q96SA4 455 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 RSPO3Q9BXY4 272 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-225ENST00000494465 AMBRA1Q9C0C7 1298 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 ZSCAN32Q9NX65 697 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 NDUFAF4Q9P032 175 aa15.61■□□□□ 0.09
ATG4B-225ENST00000494465 PRAMEF27A3QJZ7 478 aa15.6■□□□□ 0.09
ATG4B-225ENST00000494465 VGLL3A8MV65 326 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms