RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 A8MUI8 341 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 H0Y8G0 127 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SGK1O00141 431 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 BUB1O43683 1085 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SDC3O75056 442 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 KIAA0754O94854 1291 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TOMM40O96008 361 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CA3P07451 260 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 HMBSP08397 361 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TOP1P11387 765 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 FCGR1AP12314 374 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 DARSP14868 501 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ATP6V1C1P21283 382 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CTNNA2P26232 953 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 PTGFRP43088 359 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ABCG1P45844 678 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SLC1A6P48664 564 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ACADVLP49748 655 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 DNA2P51530 1060 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 NAPAP54920 295 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 OR1D5P58170 312 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 UBE2HP62256 183 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CDKL1Q00532 357 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SRSF9Q13242 221 aaKnown RBP eCLIP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SNTA1Q13424 505 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF528Q3MIS6 628 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 DCAF4L1Q3SXM0 396 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF311Q5JNZ3 666 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SIRPB2Q5JXA9 342 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 PDSS1Q5T2R2 415 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 STXBP5Q5T5C0 1151 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 LYPLAL1Q5VWZ2 237 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 LIPJQ5W064 366 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 RTL6Q6ICC9 239 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CDC42EP5Q6NZY7 148 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CBLN3Q6UW01 205 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 CWC27Q6UX04 472 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TMEM64Q6YI46 380 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 RFPL4BQ6ZWI9 263 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 FCRLAQ7L513 359 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TRMT1LQ7Z2T5 733 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ELMOD1Q8N336 334 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TEX26Q8N6G2 289 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 TRIM58Q8NG06 486 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 GOLGA5Q8TBA6 731 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SLC35C1Q96A29 364 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 NXPE2Q96DL1 559 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ADGRG7Q96K78 797 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SENP8Q96LD8 212 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 LURAP1Q96LR2 239 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 RBM24Q9BX46 236 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 SHARPINQ9H0F6 387 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 THAP2Q9H0W7 228 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 NCOR1P1Q9H4R4 102 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 EGLN3Q9H6Z9 239 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 KLHL8Q9P2G9 620 aaPredicted RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 P2RX2Q9UBL9 471 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 DIMT1Q9UNQ2 313 aaKnown RBP3.98□□□□□ -1.77
GTF3A-208ENST00000493903 ATP10AO60312 1499 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 REREQ9P2R6 1566 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 DIP2CQ9Y2E4 1556 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 UHRF1BP1Q6BDS2 1440 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 IGLV9-49A0A0B4J1Y8 123 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 MBLAC1A4D2B0 266 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 EME2A4GXA9 379 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 EPHB6O15197 1021 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 MLNRO43193 412 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 EML2O95834 649 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 LIFP15018 202 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CALB2P22676 271 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CCNCP24863 283 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 GDI1P31150 447 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CHI3L1P36222 383 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 ACADSBP45954 432 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 LIMK2P53671 638 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 C21orf58P58505 322 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CCNA1P78396 465 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CNTN1Q12860 1018 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 IDI1Q13907 227 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 BTG3Q14201 252 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 RFTN1Q14699 578 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 PDK3Q15120 406 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 ZMYND11Q15326 602 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 SF3B4Q15427 424 aaKnown RBP eCLIP3.97□□□□□ -1.772e-7■■■■■ 32.9
GTF3A-208ENST00000493903 C1orf189Q5VU69 101 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 LIPKQ5VXJ0 399 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CAPN13Q6MZZ7 669 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 SLC39A4Q6P5W5 647 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 KCTD8Q6ZWB6 473 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 TAS2R42Q7RTR8 314 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 GOLGA7Q7Z5G4 137 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 C5orf24Q7Z6I8 188 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CBWD2Q8IUF1 395 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 ZDHHC17Q8IUH5 632 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CDH26Q8IXH8 852 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 NRACQ8N912 160 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 SLC37A3Q8NCC5 494 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CD99L2Q8TCZ2 262 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 TMEM37Q8WXS4 190 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms