RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ACOX3O15254 700 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 MBTPS2O43462 519 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 PRICKLE3O43900 615 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF682O95780 498 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 FABP3P05413 133 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 IL3P08700 152 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 PABPC4LP0CB38 370 aaKnown RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 THRBP10828 461 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 GABRG2P18507 467 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 FUT4P22083 530 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 TPP2P29144 1249 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 NTSP30990 170 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 CDKN2CP42773 168 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SSR2P43308 183 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 MANFP55145 182 aaKnown RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 ESRRGP62508 458 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 PPP2CBP62714 309 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 PPP2CAP67775 309 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 TOP3AQ13472 1001 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 ZIC1Q15915 447 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SLC36A3Q495N2 470 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 MANEAQ5SRI9 462 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 STK32CQ86UX6 486 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 FAM124AQ86V42 546 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 ZDHHC21Q8IVQ6 265 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 LINC01555Q8NAE3 123 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 OR2L5Q8NG80 312 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 OR2L3Q8NG85 312 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 WDR48Q8TAF3 677 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 OR1E3Q8WZA6 343 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 TMBIM1Q969X1 311 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 NEURL3Q96EH8 262 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SLC35A5Q9BS91 424 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SPATA5L1Q9BVQ7 753 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 IKZF5Q9H5V7 419 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 UBE2ZQ9H832 354 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 VCX3AQ9NNX9 186 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 BRWD1Q9NSI6 2320 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 DDX18Q9NVP1 670 aaKnown RBP9.52□□□□□ -0.89
PRPF3-206ENST00000493553 BLOC1S6Q9UL45 172 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SH2B3Q9UQQ2 575 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 WDR37Q9Y2I8 494 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 KLK4Q9Y5K2 254 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 HSPE1-MOB4S4R3N1 261 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 CHD9Q3L8U1 2897 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 C7orf72A4D263 438 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 FAM149AA5PLN7 773 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 LRIT2A6NDA9 550 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 POM121BA6NF01 834 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 C10orf142B7Z368 130 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 C5orf58C9J3I9 102 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 VILLO15195 856 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ADAMDEC1O15204 470 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ZW10O43264 779 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TNFSF14O43557 240 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SLITRK5O94991 958 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SOX30O94993 753 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 C6orf47O95873 294 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 VIPP01282 170 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 FUCA1P04066 466 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ALPLP05186 524 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CHRM5P08912 532 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CD8BP10966 210 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 FPR1P21462 350 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 DNAJA1P31689 397 aaKnown RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ACTR1BP42025 376 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 FRKP42685 505 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CRATP43155 626 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ACTR1AP61163 376 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SKP1P63208 163 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CLCA4Q14CN2 919 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PLCL1Q15111 1095 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 NKG7Q16617 165 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SPDYE7PQ495Y7 208 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 GTDC1Q4AE62 458 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 LIN52Q52LA3 116 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 LRRC23Q53EV4 343 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 NIPAL1Q6NVV3 410 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 BORAQ6PGQ7 559 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SHQ1Q6PI26 577 aaKnown RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TTC33Q6PID6 262 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TMEM64Q6YI46 380 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TMEM26Q6ZUK4 368 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 IQCHQ86VS3 1027 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PTOV1Q86YD1 416 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CLECL1Q8IZS7 167 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SDR16C5Q8N3Y7 309 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 RNF175Q8N4F7 328 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ANKRD53Q8N9V6 530 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TMEM145Q8NBT3 493 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF740Q8NDX6 193 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SETD9Q8NE22 299 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms