RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 TMEM115Q12893 351 aaPredicted RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 SLC13A2Q13183 592 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 PTGES3Q15185 160 aaKnown RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 ZNF770Q6IQ21 691 aaPredicted RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 DEFB128Q7Z7B8 93 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 TMEM25Q86YD3 366 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 LRRC56Q8IYG6 542 aaPredicted RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 PARP16Q8N5Y8 322 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 POC5Q8NA72 575 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 UTP15Q8TED0 518 aaKnown RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 POF1BQ8WVV4 589 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 APOBEC4Q8WW27 367 aaKnown RBP9.24□□□□□ -0.93
TSC1-207ENST00000493467 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 LRIG1Q96JA1 1093 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 MRGPRX3Q96LB0 322 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 TAPBPLQ9BX59 468 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 ZBP1Q9H171 429 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 TCF7L1Q9HCS4 588 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 AMBNQ9NP70 447 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 FZD3Q9NPG1 666 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 ITM2CQ9NQX7 267 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 SACM1LQ9NTJ5 587 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 MS4A12Q9NXJ0 267 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 MKLN1Q9UL63 735 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 CFL2Q9Y281 166 aa9.24□□□□□ -0.93
TSC1-207ENST00000493467 LOC110117498-PIK3R3F6TDL0 507 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 H3BM21 787 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 J3KTA2 159 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CACNB4O00305 520 aaPredicted RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 PCDH17O14917 1159 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TBX19O60806 448 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ADAP00813 363 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 NPPBP16860 134 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ENDOUP21128 410 aaKnown RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 SOX6P35712 828 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CHI3L1P36222 383 aaPredicted RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 CRISP1P54107 249 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TPTEP56180 551 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 DSTNP60981 165 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
TSC1-207ENST00000493467 C2orf80Q0P641 193 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SLC5A12Q1EHB4 618 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TMEM201Q5SNT2 666 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 HIST2H2AA3Q6FI13 130 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TMEM220Q6QAJ8 160 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CCDC149Q6ZUS6 474 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CCDC190Q86UF4 302 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 RNF130Q86XS8 419 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 FAM83FQ8NEG4 500 aaPredicted RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 OR52J3Q8NH60 311 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 WDR48Q8TAF3 677 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SLC5A11Q8WWX8 675 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 PIK3R3Q92569 461 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 UBE2E3Q969T4 207 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CIDECQ96AQ7 238 aaPredicted RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 CENPOQ9BU64 300 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 WRAP53Q9BUR4 548 aaKnown RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 CCDC32Q9BV29 185 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SLC25A19Q9HC21 320 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 GULP1Q9UBP9 304 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ACSL6Q9UKU0 697 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SH2B3Q9UQQ2 575 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 A0A1W2PRB8 838 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TRBC2A0A5B9 178 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 NEDD8-MDP1E9PL57 170 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 CCRL2O00421 344 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 LILRB5O75023 590 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 IFNW1P05000 195 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 GJA1P17302 382 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 UQCRC2P22695 453 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 DDX6P26196 483 aaKnown RBP eCLIP9.23□□□□□ -0.93
TSC1-207ENST00000493467 PDHA2P29803 388 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 HOXD12P35452 270 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 SNRPGP62308 76 aaKnown RBP9.23□□□□□ -0.93
TSC1-207ENST00000493467 MC1RQ01726 317 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 RHAGQ02094 409 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 NOGQ13253 232 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ZNF805Q5CZA5 627 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 TRIM61Q5EBN2 209 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ATAD3BQ5T9A4 648 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 MEDAGQ5VYS4 303 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 RNLSQ5VYX0 342 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 PLAG1Q6DJT9 500 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 FRMPD2BQ6IN97 320 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 LILRA6Q6PI73 481 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ADAMTSL4Q6UY14 1074 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 LIPIQ6XZB0 460 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 ANKRD33Q7Z3H0 272 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 NATD1Q8N6N6 113 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 AQP11Q8NBQ7 271 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 GALNT6Q8NCL4 622 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 FAM46DQ8NEK8 389 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 OR9A1PQ8NGU1 263 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 IRF7Q92985 503 aa9.23□□□□□ -0.93
TSC1-207ENST00000493467 VWCEQ96DN2 955 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms