RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■□□□ 13.9
CDC42SE1-206ENST00000492796 C12orf65Q9H3J6 166 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 STMN3Q9NZ72 180 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 LUZP4Q9P127 313 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 VPS29Q9UBQ0 182 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TRBV11-1A0A0K0K1C0 115 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 A0A1W2PR48 441 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 C17orf105B2RV13 164 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 FCHO1O14526 889 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 DYRK3O43781 588 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 TYROBPO43914 113 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 SPAG7O75391 227 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 GPR75O95800 540 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 GBAP04062 536 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 KLK1P06870 262 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 UROSP10746 265 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 SERPINB5P36952 375 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 HTR6P50406 440 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 GPR143P51810 404 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 MAPK12P53778 367 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 FOLH1Q04609 750 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 CEP85LQ5SZL2 805 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 NDUFAF5Q5TEU4 345 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 FCRLBQ6BAA4 426 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 LRIG3Q6UXM1 1119 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 ST13P4Q8IZP2 240 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 KIF2BQ8N4N8 673 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 C1orf52Q8N6N3 182 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 AMER2Q8N7J2 671 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR1N1Q8NGS0 311 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR8K3Q8NH51 312 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 PTPMT1Q8WUK0 201 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 CHTF18Q8WVB6 975 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 RBM18Q96H35 190 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 ART5Q96L15 291 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 ZIM3Q96PE6 472 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 KCNA7Q96RP8 456 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 HBEGFQ99075 208 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 NPAS2Q99743 824 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 UTP23Q9BRU9 249 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 ACPTQ9BZG2 426 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 SSU72Q9NP77 194 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 TEX10Q9NXF1 929 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 PLA2G3Q9NZ20 509 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 SLC17A7Q9P2U7 560 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 COPS7AQ9UBW8 275 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 MCM8Q9UJA3 840 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 TIMM22Q9Y584 194 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 PCDHGB6Q9Y5F9 930 aa9.94□□□□□ -0.82
CDC42SE1-206ENST00000492796 C1orf226A1L170 272 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GABRR3A8MPY1 467 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 NPHS1O60500 1241 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 PRAMEF2O60811 474 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 VPS4BO75351 444 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 PRKRAO75569 313 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ZFAND5O76080 213 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 MYZAPP0CAP1 466 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ALOX15P16050 662 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 TNNI3P19429 210 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ALDH3A1P30838 453 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GALNSP34059 522 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GSTM5P46439 218 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 FOXA1P55317 472 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 MLF1P58340 268 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ID2Q02363 134 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ACSM2AQ08AH3 577 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 TUBA3CQ13748 450 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 SPRED3Q2MJR0 410 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ACSM2BQ68CK6 577 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 TUBA3EQ6PEY2 450 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 HSDL2Q6YN16 418 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 RNF165Q6ZSG1 346 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR4N5Q8IXE1 308 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 HORMAD2Q8N7B1 307 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GALNT11Q8NCW6 608 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 CATSPER1Q8NEC5 780 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 SLC2A12Q8TD20 617 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 SNRNP40Q96DI7 357 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 PGM2Q96G03 612 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 FAIM2Q9BWQ8 316 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GATA5Q9BWX5 397 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 CDCP1Q9H5V8 836 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 EML4Q9HC35 981 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 AGPAT4Q9NRZ5 378 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 SIRT5Q9NXA8 310 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ZNF223Q9UK11 482 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 VPS4AQ9UN37 437 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 ACTL7BQ9Y614 415 aa9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 COPG1Q9Y678 874 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-206ENST00000492796 GLOD5A6NK44 160 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 TM9SF1O15321 606 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 CTIFO43310 598 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 PCDH7O60245 1069 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR10H2O60403 315 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 MAN1A2O60476 641 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 DDAH2O95865 285 aa9.92□□□□□ -0.82
CDC42SE1-206ENST00000492796 F10P00742 488 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms