RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 SERTAD2Q14140 314 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 DOC2AQ14183 400 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 ZKSCAN8Q15776 578 aaPredicted RBP18.41■□□□□ 0.54
NELFE-212ENST00000492539 CDKL4Q5MAI5 379 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 RTL6Q6ICC9 239 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 ZNF793Q6ZN11 406 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 TRILQ7L0X0 811 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 OR5M9Q8NGP3 310 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 SLC2A12Q8TD20 617 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 KIAA1191Q96A73 305 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 SGCZQ96LD1 299 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 EFCAB11Q9BUY7 163 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 OR8D2Q9GZM6 311 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 CAB39LQ9H9S4 337 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 LYRM4Q9HD34 91 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 WWOXQ9NZC7 414 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 NCKAP5O14513 1909 aa18.41■□□□□ 0.54
NELFE-212ENST00000492539 C17orf105B2RV13 164 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 AQP7O14520 342 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 LDB3O75112 727 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 STMN1P16949 149 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 KCNC1P48547 511 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 TGM3Q08188 693 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 FOXO1Q12778 655 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 E2F2Q14209 437 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 FBXO48Q5FWF7 155 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 CES4AQ5XG92 561 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 ZNF585AQ6P3V2 769 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 B3GNT6Q6ZMB0 384 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 UBE3DQ7Z6J8 389 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 TMEM200AQ86VY9 491 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 SLC44A1Q8WWI5 657 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 SREK1Q8WXA9 508 aaKnown RBP18.4■□□□□ 0.54
NELFE-212ENST00000492539 KCNC2Q96PR1 638 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 F2RL3Q96RI0 385 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 MAPKAP1Q9BPZ7 522 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 ROGDIQ9GZN7 287 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 CNOT10Q9H9A5 744 aaKnown RBP18.4■□□□□ 0.54
NELFE-212ENST00000492539 SLC24A3Q9HC58 644 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 SACM1LQ9NTJ5 587 aa18.4■□□□□ 0.54
NELFE-212ENST00000492539 SUSD5O60279 629 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 STK16O75716 305 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 GLI4P10075 376 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 CCL3P10147 92 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 EPORP19235 508 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 ZFP36L2P47974 494 aaKnown RBP18.39■□□□□ 0.53
NELFE-212ENST00000492539 HSPA7P48741 367 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 DNASE1L1P49184 302 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 ART1P52961 327 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 RAB10P61026 200 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 VSNL1P62760 191 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 UAP1Q16222 522 aaPredicted RBP18.39■□□□□ 0.53
NELFE-212ENST00000492539 PDK4Q16654 411 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 SULT1C3Q6IMI6 304 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 WDR93Q6P2C0 686 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 OPN5Q6U736 354 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 FAM47EQ6ZV65 393 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 CLYBLQ8N0X4 340 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 SPATA6LQ8N4H0 392 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 PDPRQ8NCN5 879 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 OR5L2Q8NGL0 311 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 ZNF721Q8TF20 911 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 ESAMQ96AP7 390 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 MRRFQ96E11 262 aaKnown RBP18.39■□□□□ 0.53
NELFE-212ENST00000492539 PAFAH2Q99487 392 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 MS4A8Q9BY19 250 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 TUBA8Q9NY65 449 aaPredicted RBP18.39■□□□□ 0.53
NELFE-212ENST00000492539 ATG4BQ9Y4P1 393 aa18.39■□□□□ 0.53
NELFE-212ENST00000492539 A0A0G2JNJ9 132 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 PHGDHO43175 533 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 SCELO95171 688 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 ETHE1O95571 254 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 INHBAP08476 426 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 CELA3AP09093 270 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 CD1DP15813 335 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 TNNI3P19429 210 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 ATP5A1P25705 553 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 DNAJA1P31689 397 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 IGLV3-21P80748 117 aaPredicted RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 LAPTM5Q13571 262 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 TBCCQ15814 346 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 MPEG1Q2M385 716 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 KRTAP21-3Q3LHN1 58 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 GPSM1Q86YR5 675 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 SRFBP1Q8NEF9 429 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 OR10Q1Q8NGQ4 319 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 UHMK1Q8TAS1 419 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 ZNF473Q8WTR7 871 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 ANKRD9Q96BM1 317 aaPredicted RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 TBCDQ9BTW9 1192 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 EPB41L4BQ9H329 900 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 SH2D2AQ9NP31 389 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 Q9UFV3 132 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.38■□□□□ 0.53
NELFE-212ENST00000492539 ZNF180Q9UJW8 692 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 PTBP2Q9UKA9 531 aaKnown RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 IKBKGQ9Y6K9 419 aa18.38■□□□□ 0.53
NELFE-212ENST00000492539 V9GYY5 206 aaPredicted RBP18.38■□□□□ 0.53
NELFE-212ENST00000492539 EXOC1LA0A1B0GW35 172 aa18.37■□□□□ 0.53
NELFE-212ENST00000492539 HMX2A2RU54 273 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms