RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 A0A1W2PRS3 328 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 OR14I1A6ND48 311 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 A8MVJ9 347 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 KIR3DP1A8MWS1 328 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 WWP2O00308 870 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 RTCAO00442 366 aaKnown RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 PLPP1O14494 284 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 TFECO14948 347 aaPredicted RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 HS6ST1O60243 411 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 NADKO95544 446 aaPredicted RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 S100BP04271 92 aaPredicted RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 COX6B1P14854 86 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 PTX3P26022 381 aaPredicted RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 ELAVL4P26378 380 aaKnown RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 CASQ1P31415 396 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 BSGP35613 385 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 HNRNPH2P55795 449 aaKnown RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 PPIAP62937 165 aaKnown RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 TFF3Q07654 80 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 STX4Q12846 297 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 SLAMF1Q13291 335 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 BMPR2Q13873 1038 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM83EQ2M2I3 478 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 NDUFAF5Q5TEU4 345 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 OPN5Q6U736 354 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 DGAT2L6Q6ZPD8 337 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 RTL4Q6ZR62 310 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 GDF7Q7Z4P5 450 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 GPR180Q86V85 440 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 KCTD4Q8WVF5 259 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 ASB15Q8WXK1 588 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 RGMAQ96B86 450 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 FBXL20Q96IG2 436 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 LURAP1Q96LR2 239 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM173AQ9BQD7 235 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 TTTY12Q9BZ98 90 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 OR8D2Q9GZM6 311 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 OR51B5Q9H339 312 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 ACSS3Q9H6R3 686 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 RPF2Q9H7B2 306 aaKnown RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 COPS7BQ9H9Q2 264 aaPredicted RBP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 IL1RL2Q9HB29 575 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 PROK2Q9HC23 129 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 DMRT3Q9NQL9 472 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 HPF1Q9NWY4 346 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 PCDHGA11Q9Y5H2 935 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 MED13LQ71F56 2210 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 EXPH5Q8NEV8 1989 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A096LPK6 155 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A1W2PR48 441 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SUPT3HB4E1H0 165 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 HRKO00198 91 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TMPRSS11DO60235 418 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SUSD5O60279 629 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SUPT3HO75486 399 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 EEDO75530 441 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 GPR75O95800 540 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 CLPSP04118 112 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 IFNA16P05015 189 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 CPN2P22792 545 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SSTR2P30874 369 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RFC3P40938 356 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RIPPLY3P57055 190 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 GPR85P60893 370 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 IRF9Q00978 393 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TNFRSF17Q02223 184 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 FOLH1Q04609 750 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TBL3Q12788 808 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SLMAPQ14BN4 828 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TESK1Q15569 626 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 PFKFB4Q16877 469 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF750Q32MQ0 723 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 GXYLT1Q4G148 440 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 C10orf62Q5T681 223 aaPredicted RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 MROH9Q5TGP6 573 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 C18orf63Q68DL7 685 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RTL6Q6ICC9 239 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TMEM211Q6ICI0 200 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 PAOXQ6QHF9 649 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 IL20RBQ6UXL0 311 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SYT10Q6XYQ8 523 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 C3P1Q6ZMU1 363 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RAPH1Q70E73 1250 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TRILQ7L0X0 811 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC22A16Q86VW1 577 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 C9orf40Q8IXQ3 194 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 DND1Q8IYX4 353 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ST13P4Q8IZP2 240 aaPredicted RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 PLD6Q8N2A8 252 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RNF175Q8N4F7 328 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TMEM151AQ8N4L1 468 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TEX9Q8N6V9 391 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF441Q8N8Z8 693 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 PAQR8Q8TEZ7 354 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC44A1Q8WWI5 657 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ANP32BQ92688 251 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 RBM18Q96H35 190 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 LRRC1Q9BTT6 524 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms