RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CYP2A7P20853 494 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CD247P20963 164 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 HTR1EP28566 365 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 STAT5AP42229 794 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MRPL19P49406 292 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 BCAP31P51572 246 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SP140Q13342 867 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NANOGP8Q6NSW7 305 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 INO80CQ6PI98 192 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SYTL1Q8IYJ3 562 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MCOLN3Q8TDD5 553 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CHID1Q9BWS9 393 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ATG10Q9H0Y0 220 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 TUBB1Q9H4B7 451 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SLC52A3Q9NQ40 469 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SELENONQ9NZV5 590 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 IL17BQ9UHF5 180 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 B3GNT3Q9Y2A9 372 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PCDHGA4Q9Y5G9 962 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 KLK4Q9Y5K2 254 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MRPS18BQ9Y676 258 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 K7EPI3 171 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PPP6CO00743 305 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF749O43361 778 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 DEAF1O75398 565 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SEC14L2O76054 403 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ENO2P09104 434 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MTHFD2P13995 350 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NCK1P16333 377 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 YAP1P46937 504 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ALDH3A2P51648 485 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PSMD7P51665 324 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ARSFP54793 590 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 DIO3P55073 304 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ITGA1P56199 1179 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CYP4F2P78329 520 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CLCQ05315 142 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ABHD18Q0P651 414 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 OTUD3Q5T2D3 398 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 FAM219BQ5XKK7 198 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NIPAL1Q6NVV3 410 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 FBXO42Q6P3S6 717 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 AGTRAPQ6RW13 159 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 ZC3H7AQ8IWR0 971 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 OR8K5Q8NH50 307 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 STAG3L4Q8TBR4 150 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 VPS33AQ96AX1 596 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CCDC138Q96M89 665 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NSMCE2Q96MF7 247 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 RNF145Q96MT1 663 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MUS81Q96NY9 551 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 KCNA7Q96RP8 456 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SEPHS2Q99611 448 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 DPH7Q9BTV6 452 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 TRIM8Q9BZR9 551 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 GPN2Q9H9Y4 310 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 FANCEQ9HB96 536 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SYTL2Q9HCH5 934 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 LHX9Q9NQ69 397 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 STARD5Q9NSY2 213 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 AIG1Q9NVV5 245 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CUEDC1Q9NWM3 386 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 MAGEL2Q9UJ55 1249 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 SERTAD3Q9UJW9 196 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PSME2Q9UL46 239 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PLCL2Q9UPR0 1127 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 LOC105369274A0A096LPK9 316 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 LOC102723532A0A0G2JNH3 316 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 KERAO60938 352 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ABCB7O75027 752 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SLC22A3O75751 556 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CLPXO76031 633 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 GUCA1CO95843 209 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PRR35P0CG20 571 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CDH1P12830 882 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 MATN1P21941 496 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 RORAP35398 523 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 HSD17B2P37059 387 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CASP2P42575 452 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 TBPL1P62380 186 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PRDX1Q06830 199 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ATP1A4Q13733 1029 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 OR4D1Q15615 310 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 FXNQ16595 210 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 RBM48Q5RL73 367 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 OR4N4Q8N0Y3 316 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CLEC4FQ8N1N0 589 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 NKAPQ8N5F7 415 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ESX1Q8N693 406 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CT55Q8WUE5 264 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 TANKQ92844 425 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ITPKCQ96DU7 683 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 RDH12Q96NR8 316 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 NSUN5Q96P11 429 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ATOH8Q96SQ7 321 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms