RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 EML4Q9HC35 981 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 MMACHCQ9Y4U1 282 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 PCDHGB6Q9Y5F9 930 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 FBN2P35556 2912 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 MYO7BQ6PIF6 2116 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 ANKDD1BA6NHY2 528 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RTCAO00442 366 aaKnown RBP11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 B3GALT2O43825 422 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 NPHS1O60500 1241 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 UNC5CO95185 931 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 HSPA4LO95757 839 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 SERPINE1P05121 402 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 DHRS4L1P0CG22 281 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 PCNAP12004 261 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 BGNP21810 368 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 LIM2P55344 173 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 PKNOX1P55347 436 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RAB38P57729 211 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 MLF1P58340 268 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 PHEXP78562 749 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 STX3Q13277 289 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RCN2Q14257 317 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RNFT1Q5M7Z0 435 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 ATG16L1Q676U5 607 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 MED27Q6P2C8 311 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 FRMD7Q6ZUT3 714 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 LAS2Q8IYD9 372 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RNF175Q8N4F7 328 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 OR4F6Q8NGB9 312 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 OR52B6Q8NGF0 335 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 DNAJB8Q8NHS0 232 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RELTQ969Z4 430 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 REPS1Q96D71 796 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 FAR2Q96K12 515 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 CDK15Q96Q40 435 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 SERINC2Q96SA4 455 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 NTMT1Q9BV86 223 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 MS4A8Q9BY19 250 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 SHCBP1LQ9BZQ2 653 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 GSTO2Q9H4Y5 243 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 TRIM45Q9H8W5 580 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 ZBTB26Q9HCK0 441 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 MID1IP1Q9NPA3 183 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 DAPP1Q9UN19 280 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 RNF11Q9Y3C5 154 aa11.84□□□□□ -0.51
SEC61A1-206ENST00000491668 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 MYOCOSA0A1B0GUC4 107 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 TMEM200CA6NKL6 621 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 H3BQF6 201 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 OR7A17O14581 309 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 UGDHO60701 494 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 ZG16O60844 167 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SH3BGRLO75368 114 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 MYO1DO94832 1006 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 OR4F21O95013 312 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SP1P08047 785 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 GRK2P25098 689 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 HMOX2P30519 316 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 TRHRP34981 398 aaPredicted RBP11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SERPINB5P36952 375 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 MTTPP55157 894 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 HSD17B7P56937 341 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 IFT88Q13099 833 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 GRHL2Q6ISB3 625 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 TRIM40Q6P9F5 258 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 GFRALQ6UXV0 394 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 C16orf47Q6ZP98 133 aaPredicted RBP11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 CLNKQ7Z7G1 428 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SIAH3Q8IW03 269 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 CHERPQ8IWX8 916 aaKnown RBP11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 B3GNT7Q8NFL0 401 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 OR7G3Q8NG95 312 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SUN3Q8TAQ9 357 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 FAM76AQ8TAV0 307 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 FRMD6Q96NE9 622 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 MAPKAP1Q9BPZ7 522 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 SORBS1Q9BX66 1292 aaKnown RBP11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 ELOVL6Q9H5J4 265 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 PRTFDC1Q9NRG1 225 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 PCDHGA11Q9Y5H2 935 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 PCNX1Q96RV3 2341 aa11.83□□□□□ -0.52
SEC61A1-206ENST00000491668 ADGRG4Q8IZF6 3080 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TMEM114B3SHH9 223 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 PPP6CO00743 305 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SCELO95171 688 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ESRRBO95718 433 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 CRYABP02511 175 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms