RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
CTDSP1-210ENST00000491064 IKZF3Q9UKT9 509 aa12.53□□□□□ -0.4
CTDSP1-210ENST00000491064 MXRA5Q9NR99 2828 aa12.53□□□□□ -0.4
CTDSP1-210ENST00000491064 EEF1E1-BLOC1S5C9J1V9 151 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 LDB3O75112 727 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 AHSGP02765 367 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 MTTPP55157 894 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 RCN2Q14257 317 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 ADPRMQ3LIE5 342 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 NSUN5P2Q63ZY6 315 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 TRIM40Q6P9F5 258 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 C9orf40Q8IXQ3 194 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 RASGEF1CQ8N431 466 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 SLC22A8Q8TCC7 542 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 SMPDL3BQ92485 455 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 ZNF592Q92610 1267 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 Q96MF0 132 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 JSRP1Q96MG2 331 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 DACH2Q96NX9 599 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 REXO4Q9GZR2 422 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 HOMER3Q9NSC5 361 aa12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-210ENST00000491064 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CLEC3AO75596 197 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 IL18BPO95998 194 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 KRT14P02533 472 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 C1QAP02745 245 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CCDC175P0C221 793 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 C1GALT1C1LP0DN25 315 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 GNAZP19086 355 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CTSSP25774 331 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 GDF1P27539 372 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 GSTM2P28161 218 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 OPRM1P35372 400 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 PPP2R2BQ00005 443 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 ID2Q02363 134 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 SLBPQ14493 270 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 ABHD17CQ6PCB6 329 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 OR10G3Q8NGC4 313 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 PIP5K1AQ99755 562 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 COPS7BQ9H9Q2 264 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CNIH4Q9P003 139 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 CNOT11Q9UKZ1 510 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
CTDSP1-210ENST00000491064 DSCAMO60469 2012 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 CHD3Q12873 2000 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 MED12LQ86YW9 2145 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 MBD3L4A6NDZ8 208 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 MBD3L3A6NE82 208 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 MBD3L5A6NJ08 208 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SMPD2O60906 423 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 LRATO95237 230 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 CRYMQ14894 314 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.419e-8■■□□□ 12.6
CTDSP1-210ENST00000491064 VASNQ6EMK4 673 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 PRSS57Q6UWY2 283 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 CNTN4Q8IWV2 1026 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 DND1Q8IYX4 353 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 MBD3L2Q8NHZ7 208 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 ANKRD9Q96BM1 317 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SENP5Q96HI0 755 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 TRIB1Q96RU8 372 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 DOHHQ9BU89 302 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 BDH2Q9BUT1 245 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 LYRM4Q9HD34 91 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 CAMK2AQ9UQM7 478 aa12.5□□□□□ -0.41
CTDSP1-210ENST00000491064 SH3D21A4FU49 640 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 ANKDD1BA6NHY2 528 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 HRKO00198 91 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 CDC7O00311 574 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 WDR47O94967 919 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 COX7A2P14406 83 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 PGAM1P18669 254 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 GDF5P43026 501 aa12.49□□□□□ -0.41
CTDSP1-210ENST00000491064 C18orf21Q32NC0 220 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms