RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 HIST1H2AJQ99878 128 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 H2AFJQ9BTM1 129 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 TSSK6Q9BXA6 273 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 MRPL9Q9BYD2 267 aaKnown RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 MYO7AQ13402 2215 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 HOXA2O43364 376 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 TSC22D2O75157 780 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 IDSP22304 550 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 ZBTB37Q5TC79 503 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 RNLSQ5VYX0 342 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 FAM205BPQ63HN1 556 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 BCDIN3DQ7Z5W3 292 aaKnown RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 PDZD3Q86UT5 571 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 DENND1CQ8IV53 801 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 NXPE1Q8N323 547 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 C9orf62Q8N4C0 152 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 FBXL6Q8N531 539 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 FBXO22Q8NEZ5 403 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 DNAJA4Q8WW22 397 aaPredicted RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 AUTS2Q8WXX7 1259 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 HYLS1Q96M11 299 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 KCTD7Q96MP8 289 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 TMEM175Q9BSA9 504 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 MARVELD1Q9BSK0 173 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 KATNB1Q9BVA0 655 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 GALNT9Q9HCQ5 603 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 OR5K3A6NET4 321 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 ORC5O43913 435 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC43A1O75387 559 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 SOX14O95416 240 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 IGFBP1P08833 259 aaPredicted RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 BPIP17213 487 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 CD22P20273 847 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 CCR7P32248 378 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 OR1D2P34982 312 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 HNMTP50135 292 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 RHOAP61586 193 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 TMIGD1Q6UXZ0 262 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 C16orf59Q7L2K0 433 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 HJURPQ8NCD3 748 aaPredicted RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 LRRC20Q8TCA0 184 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 C11orf24Q96F05 449 aaPredicted RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 CCDC120Q96HB5 630 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 IGSF21Q96ID5 467 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 DCLRE1CQ96SD1 692 aaKnown RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 PPP1R3EQ9H7J1 279 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 SPATA6Q9NWH7 488 aaPredicted RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 MALT1Q9UDY8 824 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 DNMT3AQ9Y6K1 912 aaPredicted RBP18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 OR6C75A6NL08 312 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 CLDN7O95471 211 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 OSMP13725 252 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 RHCEP18577 417 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 ASMTP46597 345 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 ABATP80404 500 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 IRF8Q02556 426 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 RBBP4Q09028 425 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 NFE2L1Q14494 772 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF730Q6ZMV8 503 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 OTOP2Q7RTS6 562 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 CAMKMTQ7Z624 323 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 MED18Q9BUE0 208 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 ATG10Q9H0Y0 220 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 B3GAT2Q9NPZ5 323 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 COMMD3Q9UBI1 195 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 REV1Q9UBZ9 1251 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 PCDHGB7Q9Y5F8 929 aa18.43■□□□□ 0.54
SNAPC3-206ENST00000490969 SCO1O75880 301 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 ANXA4P09525 319 aaPredicted RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 CPEP16870 476 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 RAB25P57735 213 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 PPP3R1P63098 170 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 RAE1P78406 368 aaKnown RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 CNIH2Q6PI25 160 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 TMEM145Q8NBT3 493 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 WDR20Q8TBZ3 569 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 NDOR1Q9UHB4 597 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 YARS2Q9Y2Z4 477 aaKnown RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 FCF1Q9Y324 198 aaKnown RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 TRBC2A0A5B9 178 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 PDPK1O15530 556 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 SH3BGRLO75368 114 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 ADAP00813 363 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 PDGFAP04085 211 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 C8GP07360 202 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 STK19P49842 368 aaPredicted RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 CDK6Q00534 326 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 P2RY14Q15391 338 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 CRB2Q5IJ48 1285 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 SYT14Q8NB59 555 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 OR52N2Q8NGI0 321 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 OR52P1PQ8NH57 321 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 AKAP1Q92667 903 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 AP2M1Q96CW1 435 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 MAGEB10Q96LZ2 347 aaPredicted RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 SOSTQ9BQB4 213 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC35A5Q9BS91 424 aa18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 SPIN1Q9Y657 262 aaPredicted RBP18.42■□□□□ 0.54
SNAPC3-206ENST00000490969 PTPRSQ13332 1948 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms