RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IGHV4-39P01824 125 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 NR3C1P04150 777 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 T-ENOLP0DO92 83 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 EEF2P13639 858 aaKnown RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 TIA1P31483 386 aaKnown RBP eCLIP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 ASIC1P78348 528 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 RASGEF1BQ0VAM2 473 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 CDC37Q16543 378 aaPredicted RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 FAM174BQ3ZCQ3 159 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 USH1GQ495M9 461 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 IQCCQ4KMZ1 466 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 DCAF10Q5QP82 559 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 CYP4A22Q5TCH4 519 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 HES3Q5TGS1 186 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 C9orf57Q5W0N0 161 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 ANO5Q75V66 913 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 PHLDB2Q86SQ0 1253 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 AMIGO1Q86WK6 493 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 NUDT13Q86X67 352 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 CROCCP3Q8IVE0 287 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 EID3Q8N140 333 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 RASGEF1AQ8N9B8 481 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 KBTBD3Q8NAB2 608 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 OR2T12Q8NG77 320 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 PPTC7Q8NI37 304 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 SCARB1Q8WTV0 552 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 ING5Q8WYH8 240 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 SNX21Q969T3 373 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 VOPP1Q96AW1 172 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 THOC3Q96J01 351 aaKnown RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 CASD1Q96PB1 797 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 HIPK2Q9H2X6 1198 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 C8orf33Q9H7E9 229 aaPredicted RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 Q9H8V8 135 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 IL1RAPL2Q9NP60 686 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 IARS2Q9NSE4 1012 aaKnown RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 DNAJC17Q9NVM6 304 aaKnown RBP4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 TMEM161AQ9NX61 479 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 RAI14Q9P0K7 980 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 ENTPD4Q9Y227 616 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 PCDHGB1Q9Y5G3 927 aa4.42□□□□□ -1.7
SSX2IP-208ENST00000490476 NUP210Q8TEM1 1887 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 ESYT2A0FGR8 921 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 DENND3A2RUS2 1198 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SPECC1L-ADORA2AF8WAN1 911 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 KERAO60938 352 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SERPING1P05155 500 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 KRT7P08729 469 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SNHG28P0DPA3 235 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 EPORP19235 508 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 CDH3P22223 829 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 FCARP24071 287 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 NKX2-1P43699 371 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 HOXA1P49639 335 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SNU13P55769 128 aaKnown RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 STX1BP61266 288 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 ACTN3Q08043 901 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 TAF10Q12962 218 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 MORF4L2Q15014 288 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 PHKG1Q16816 387 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 NOTUMQ6P988 496 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 PODNL1Q6PEZ8 512 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 CREBRFQ8IUR6 639 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 PLD3Q8IV08 490 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 CCDC83Q8IWF9 413 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 PHC2Q8IXK0 858 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 NAGSQ8N159 534 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 MAB21L3Q8N8X9 362 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 CCDC63Q8NA47 563 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 NCOA7Q8NI08 942 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 OLIG1Q8TAK6 271 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 GRHL3Q8TE85 626 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 UBLCP1Q8WVY7 318 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 CD101Q93033 1021 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SGF29Q96ES7 293 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 PANK2Q9BZ23 570 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 RETREG1Q9H6L5 497 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 EVA1AQ9H8M9 152 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 TRPV4Q9HBA0 871 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 MRPL17Q9NRX2 175 aaKnown RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF701Q9NV72 531 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 SPHK1Q9NYA1 384 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 ZDHHC2Q9UIJ5 367 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 LEF1Q9UJU2 399 aaPredicted RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 FBXL5Q9UKA1 691 aa4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 RUVBL2Q9Y230 463 aaKnown RBP4.41□□□□□ -1.7
SSX2IP-208ENST00000490476 KIF26BQ2KJY2 2108 aa4.4□□□□□ -1.7
SSX2IP-208ENST00000490476 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.7
SSX2IP-208ENST00000490476 ARID2Q68CP9 1835 aa4.4□□□□□ -1.7
SSX2IP-208ENST00000490476 TRAV24A0A0B4J272 114 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 MYBPHLA2RUH7 354 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 DDX39AO00148 427 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ARPC2O15144 300 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 TEX28O15482 410 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 NTN1O95631 604 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms