RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SERINC2Q96SA4 455 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 REXO4Q9GZR2 422 aaKnown RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 RASSF4Q9H2L5 321 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 RHBGQ9H310 441 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 NOL11Q9H8H0 719 aaKnown RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 PPCSQ9HAB8 311 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 PRTFDC1Q9NRG1 225 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 DCDC2Q9UHG0 476 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 EMCNQ9ULC0 261 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 RNF11Q9Y3C5 154 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 CLCA3PQ9Y6N3 262 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 A0A0G2JN53 185 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 TRBV11-1A0A0K0K1C0 115 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 LRIT2A6NDA9 550 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 A8MT66 165 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 A8MVJ9 347 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 STX16-NPEPL1H3BU86 382 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ACOT7O00154 380 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 OR7A17O14581 309 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 STX16O14662 325 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 DYRK3O43781 588 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ITGA10O75578 1167 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 MYO1DO94832 1006 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 GSTA1P08263 222 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 PCNAP12004 261 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 KRT4P19013 534 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 TSPAN8P19075 237 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 HNRNPH1P31943 449 aaKnown RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 PTGS2P35354 604 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 CDH13P55290 713 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ADORA2A-AS1P86434 159 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 TBL3Q12788 808 aaKnown RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 E2F2Q14209 437 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 RASA2Q15283 850 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ADPRMQ3LIE5 342 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 MYLK4Q86YV6 388 aaPredicted RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 LAS2Q8IYD9 372 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 KIF2BQ8N4N8 673 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 MREGQ8N565 214 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ZFP62Q8NB50 900 aaPredicted RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 OR7G3Q8NG95 312 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 OR52B6Q8NGF0 335 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 OR5L2Q8NGL0 311 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 OR8K3Q8NH51 312 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 AGAP11Q8TF27 550 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ASB5Q8WWX0 329 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ATP6V1E2Q96A05 226 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 MS4A6EQ96DS6 147 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 C14orf79Q96F83 325 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 KCNC2Q96PR1 638 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 CDK15Q96Q40 435 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 F2RL3Q96RI0 385 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 CENPKQ9BS16 269 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 HES7Q9BYE0 225 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 ACTR8Q9H981 624 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 ZBTB26Q9HCK0 441 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 LYRM4Q9HD34 91 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 PRM3Q9NNZ6 103 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 SEMA4BQ9NPR2 832 aaPredicted RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 NECTIN3Q9NQS3 549 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 PNO1Q9NRX1 252 aaKnown RBP9.65□□□□□ -0.86
TTC28-207ENST00000490475 HPF1Q9NWY4 346 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ADGRE2Q9UHX3 823 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 PCTPQ9UKL6 214 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 FBXW2Q9UKT8 454 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 TMCO1Q9UM00 188 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 ERVK-11Q9UQG0 969 aa9.65□□□□□ -0.86
TTC28-207ENST00000490475 DNAJC13O75165 2243 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 A0A1B0GTL3 188 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 PEX1O43933 1283 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 MAN1A2O60476 641 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 CTNSO60931 367 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 TGFB1P01137 390 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 PRF1P14222 555 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 COX7A2P14406 83 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 TAC1P20366 129 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 CCT5P48643 541 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 PIK3CGP48736 1102 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 MEOX1P50221 254 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 NEK2P51955 445 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 PLA2G16P53816 162 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 SLC18A2Q05940 514 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 STX4Q12846 297 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 DDX39BQ13838 428 aaKnown RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 CPSF6Q16630 551 aaKnown RBP eCLIP9.64□□□□□ -0.87
TTC28-207ENST00000490475 TMEM35AQ53FP2 167 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 UNC50Q53HI1 259 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 NDUFAF5Q5TEU4 345 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 LIPJQ5W064 366 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 GRHL2Q6ISB3 625 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 METTL2BQ6P1Q9 378 aaKnown RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 MED27Q6P2C8 311 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 HSDL2Q6YN16 418 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 UBE3DQ7Z6J8 389 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 LCA5Q86VQ0 697 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms