RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SLC22A10Q63ZE4 541 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 LYPD8Q6UX82 237 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 TMIGD1Q6UXZ0 262 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 SLCO4C1Q6ZQN7 724 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 CHSY3Q70JA7 882 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
USP39-216ENST00000490193 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.54□□□□□ -1.2
USP39-216ENST00000490193 DND1Q8IYX4 353 aaKnown RBP7.54□□□□□ -1.2
USP39-216ENST00000490193 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 SLC15A4Q8N697 577 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 ZNF321PQ8N8H1 164 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 NAT8LQ8N9F0 302 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 FAM47BQ8NA70 645 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 TNIP2Q8NFZ5 429 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 OR2L5Q8NG80 312 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 SPATA3Q8NHX4 192 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 ZNF721Q8TF20 911 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 ANKRD7Q92527 254 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 KIAA1191Q96A73 305 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 CSF3RQ99062 836 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 ALOXE3Q9BYJ1 711 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 OR8D2Q9GZM6 311 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 PITHD1Q9GZP4 211 aaPredicted RBP7.54□□□□□ -1.2
USP39-216ENST00000490193 EXO5Q9H790 373 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 PROK2Q9HC23 129 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 ALKBH4Q9NXW9 302 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 CNIH4Q9P003 139 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 BOKQ9UMX3 212 aaPredicted RBP7.54□□□□□ -1.2
USP39-216ENST00000490193 SLC22A14Q9Y267 594 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 NINQ8N4C6 2090 aa7.54□□□□□ -1.2
USP39-216ENST00000490193 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 A0A0G2JN53 185 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 CD8B2A6NJW9 211 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 CLCA1A8K7I4 914 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 KIAA1324LA8MWY0 1029 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 C17orf105B2RV13 164 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 GPR37O15354 613 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 ETHE1O95571 254 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 TTC4O95801 387 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 IL18BPO95998 194 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 IL2RAP01589 272 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 KRT14P02533 472 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 HRGP04196 525 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 IGKV3-11P04433 115 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 C1GALT1C1LP0DN25 315 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 PGAM1P18669 254 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 GNAZP19086 355 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 SLC6A12P48065 614 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 HNMTP50135 292 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 ZNF136P52737 540 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 TERF1P54274 439 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 MTTPP55157 894 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 KCNJ2P63252 427 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 IGLV3-21P80748 117 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 CRYZQ08257 329 aaKnown RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 STX4Q12846 297 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 PCBP2Q15366 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP39-216ENST00000490193 SF3B4Q15427 424 aaKnown RBP eCLIP7.53□□□□□ -1.23e-14■■■■■ 33.9
USP39-216ENST00000490193 KCTD19Q17RG1 926 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 NSUN5P2Q63ZY6 315 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 TRIM40Q6P9F5 258 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 ABHD17CQ6PCB6 329 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 CLNKQ7Z7G1 428 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 PM20D2Q8IYS1 436 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 SLC22A8Q8TCC7 542 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 NUDT8Q8WV74 236 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 SMPDL3BQ92485 455 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 NTNG2Q96CW9 530 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 SPACA9Q96E40 222 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 HSPBAP1Q96EW2 488 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 PIP5K1AQ99755 562 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 REXO4Q9GZR2 422 aaKnown RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 PRDM14Q9GZV8 571 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 SLC6A15Q9H2J7 730 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 EHD1Q9H4M9 534 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 LYRM4Q9HD34 91 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 TRMT1Q9NXH9 659 aaKnown RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 COPS7AQ9UBW8 275 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 IKZF3Q9UKT9 509 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 GUCA1BQ9UMX6 200 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
USP39-216ENST00000490193 IKBKGQ9Y6K9 419 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 ATRQ13535 2644 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 MXRA5Q9NR99 2828 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
USP39-216ENST00000490193 HIVEP2P31629 2446 aa7.52□□□□□ -1.2
USP39-216ENST00000490193 STAB1Q9NY15 2570 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 A0A1W2PPR1 153 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ANKRD33BA6NCL7 494 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 KDM4EB2RXH2 506 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 GOLGA8MH3BSY2 632 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ARHGEF9O43307 516 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms