RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MS4A18H0YCH9 400 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TIMM23O14925 209 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC16A5O15375 505 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 POLR2DO15514 142 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ECE2O60344 883 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TSPAN1O60635 241 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 LDB3O75112 727 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 WDPCPO95876 746 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TPM1P09493 284 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 OR8G3PP0DMU2 310 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CETPP11597 493 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TPSB2P20231 275 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SRD5A2P31213 254 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 RFC2P35250 354 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CCT6AP40227 531 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 PTGFRP43088 359 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NR2C2P49116 596 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 FNTAP49354 379 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 HERV-K104P63124 156 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NUCB2P80303 420 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC34A1Q06495 639 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 GRIK2Q13002 908 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CDH18Q13634 790 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SELPLGQ14242 412 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SQLEQ14534 574 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ELAVL3Q14576 367 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TPSAB1Q15661 275 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NPTX1Q15818 432 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 DECR1Q16698 335 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CA9Q16790 459 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 DUSP6Q16828 381 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ALKBH6Q3KRA9 238 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB6CQ53S08 254 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 METTL11BQ5VVY1 283 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 METTL2BQ6P1Q9 378 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM159AQ6UWV7 190 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 Q6ZSV7 163 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CENPQQ7L2Z9 268 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 EMC1Q8N766 993 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SCCPDHQ8NBX0 429 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 LILRB4Q8NHJ6 448 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB3IL1Q8TBN0 382 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 MIPOL1Q8TD10 442 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SMPDL3BQ92485 455 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SUSD6Q92537 303 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TMEM18Q96B42 140 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ULK4Q96C45 1275 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 METTL2AQ96IZ6 378 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 TPD52L3Q96J77 140 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 APOLD1Q96LR9 279 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CASD1Q96PB1 797 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CCNL2Q96S94 520 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NPY6RQ99463 290 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NDNQ99608 321 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 C17orf62Q9BQA9 187 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SIKE1Q9BRV8 207 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ALG12Q9BV10 488 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 IDI2Q9BXS1 227 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 NMNAT2Q9BZQ4 307 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 WWP1Q9H0M0 922 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB6CQ9H0N0 254 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ZFP14Q9HCL3 533 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 B3GAT1Q9P2W7 334 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CRLS1Q9UJA2 301 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.92□□□□□ -1.942e-8■■□□□ 13.3
DEPDC1-204ENST00000489862 CPDO75976 1380 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD36BQ8N2N9 1353 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 CCDC7Q96M83 1385 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 LMO7Q8WWI1 1683 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZMYM6O95789 1325 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 MAP3K19Q56UN5 1328 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PHRF1Q9P1Y6 1649 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ITSN1Q15811 1721 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 BTBD17A6NE02 478 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD30BLA7E2S9 258 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 F8VVB4 439 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 F8VWA3 439 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 H0Y8G0 127 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PDXKO00764 312 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 CASC3O15234 703 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 LRRTM2O43300 516 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF208O43345 1280 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 OR6A2O95222 327 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 LUC7L3O95232 432 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 BAG3O95817 575 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 MOCS2O96007 188 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 CALCAP01258 141 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 UGT1A1P22309 533 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NSFP46459 744 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 GPR12P47775 334 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 SUCLG1P53597 346 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZP1P60852 638 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NONOQ15233 471 aaKnown RBP eCLIP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TRIP10Q15642 601 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 IZUMO4Q1ZYL8 232 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF528Q3MIS6 628 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZC2HC1CQ53FD0 456 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PDLIM3Q53GG5 364 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 419.6 ms