RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 GNB4Q9HAV0 340 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 MID1IP1Q9NPA3 183 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 ACOXLQ9NUZ1 547 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 MGAT4AQ9UM21 535 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 SPATA2Q9UM82 520 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 NIP7Q9Y221 180 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS26A-206ENST00000489794 FGD5Q6ZNL6 1462 aa4.54□□□□□ -1.68
VPS26A-206ENST00000489794 TRBV5-4A0A0C4DH59 114 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 SMIM30A4D0T7 59 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 PSMD3O43242 534 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 FHP07954 510 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 HOXD4P09016 255 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 SPRP35270 261 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 TAF6P49848 677 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 PRELPP51888 382 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 PEX3P56589 373 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 ACY1Q03154 408 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 CD300CQ08708 224 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 TSTA3Q13630 321 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 MPPE1Q53F39 396 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 NUFIP2Q7Z417 695 aaKnown RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 CNPY4Q8N129 248 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 SPC24Q8NBT2 197 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 OR6M1Q8NGM8 313 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 ANKRD9Q96BM1 317 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 CDHR1Q96JP9 859 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 RPP25Q9BUL9 199 aaKnown RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 TMEM245Q9H330 911 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 ZCCHC3Q9NUD5 404 aaKnown RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 MRPS2Q9Y399 296 aaKnown RBP4.53□□□□□ -1.68
VPS26A-206ENST00000489794 SNX5Q9Y5X3 404 aa4.53□□□□□ -1.68
VPS26A-206ENST00000489794 NEDD8-MDP1E9PL57 170 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 CHEK1O14757 476 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 TXNL1O43396 289 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 STBD1O95210 358 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 EZRP15311 586 aaKnown RBP4.52□□□□□ -1.69
VPS26A-206ENST00000489794 GPX3P22352 226 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 SLC1A4P43007 532 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 RPS27AP62979 156 aaKnown RBP4.52□□□□□ -1.69
VPS26A-206ENST00000489794 NPRL3Q12980 569 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
VPS26A-206ENST00000489794 CDC37Q16543 378 aaPredicted RBP4.52□□□□□ -1.69
VPS26A-206ENST00000489794 LIPJQ5W064 366 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 SEL1L3Q68CR1 1132 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 SLC25A42Q86VD7 318 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 LRRC49Q8IUZ0 686 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF781Q8N8C0 355 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 GLYATL1Q969I3 302 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 FAM46BQ96A09 425 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 ESAMQ96AP7 390 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 PCED1BQ96HM7 432 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 PUS3Q9BZE2 481 aaKnown RBP4.52□□□□□ -1.69
VPS26A-206ENST00000489794 DPEP3Q9H4B8 488 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 DNAJC11Q9NVH1 559 aa4.52□□□□□ -1.69
VPS26A-206ENST00000489794 LOC390937A0A1W2PQ73 354 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 BICDL2A1A5D9 508 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 TRIM49BA6NDI0 452 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 CSO75390 466 aaKnown RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 FRAT2O75474 233 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 OR6B1O95007 311 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 CHRNGP07510 517 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 NUDT17P0C025 328 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 TPBGLP0DKB5 382 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF18P17022 549 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 FCARP24071 287 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 IL4RP24394 825 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 LMO4P61968 165 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 RPA4Q13156 261 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 VWA2Q5GFL6 755 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 C9orf66Q5T8R8 295 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 AGAP7PQ5VUJ5 663 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 P2RY8Q86VZ1 359 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 STHQ8IWL8 128 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF713Q8N859 430 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 MRPL24Q96A35 216 aaKnown RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 FOXN4Q96NZ1 517 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 NTMT1Q9BV86 223 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 GDF3Q9NR23 364 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 HMG20BQ9P0W2 317 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 CIDEBQ9UHD4 219 aa4.51□□□□□ -1.69
VPS26A-206ENST00000489794 MRTO4Q9UKD2 239 aaKnown RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 MRPL11Q9Y3B7 192 aaKnown RBP4.51□□□□□ -1.69
VPS26A-206ENST00000489794 SLC28A1O00337 649 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 GALR3O60755 368 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 KINO60870 393 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 SH3BGRLO75368 114 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ANXA9O76027 345 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 TXNDC12O95881 172 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 MT-ND1P03886 318 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 MBL2P11226 248 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 HLA-DPA1P20036 260 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 NSFP46459 744 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 RPL34P49207 117 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 SMSP52788 366 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 GEMP55040 296 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ADARP55265 1226 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 UCP2P55851 309 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 RPL27P61353 136 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 GSTO1P78417 241 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms