RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 VIPAS39Q9H9C1 493 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 COPS7BQ9H9Q2 264 aaPredicted RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 CWC25Q9NXE8 425 aaPredicted RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 Q9UF83 564 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 TRAV34A0A0B4J273 112 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 CCDC162PA2VCL2 907 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 MCF2LO15068 1137 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 P2RX6O15547 441 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 ACSL4O60488 711 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 CLN5O75503 358 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 VIMP08670 466 aaKnown RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 FNTAP49354 379 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 MEOX2P50222 304 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 CAPZA1P52907 286 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 PTENP60484 403 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 GSTO1P78417 241 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 ABRQ12979 859 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 PPP2R5CQ13362 524 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 SMC1AQ14683 1233 aaKnown RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 ABRAXAS2Q15018 415 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 GSG1Q2KHT4 349 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 HERC4Q5GLZ8 1057 aaPredicted RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 CGB2Q6NT52 195 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 DCLRE1AQ6PJP8 1040 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 ZNF730Q6ZMV8 503 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 CCDC71Q8IV32 467 aaPredicted RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 SLC22A18ASQ8N1D0 253 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 C10orf53Q8N6V4 93 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 SPC24Q8NBT2 197 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 OCC1Q8TAD7 63 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 GPR148Q8TDV2 347 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 ZNF274Q96GC6 653 aaPredicted RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 CDHR1Q96JP9 859 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 SDHCQ99643 169 aaPredicted RBP2.31□□□□□ -2.04
NF1-213ENST00000489712 DESI2Q9BSY9 194 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 PAXXQ9BUH6 204 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 AMBNQ9NP70 447 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 VNN3Q9NY84 501 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 IL17CQ9P0M4 197 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 GMEB2Q9UKD1 530 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 CLEC4EQ9ULY5 219 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 PLEKHA6Q9Y2H5 1048 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 POMT1Q9Y6A1 747 aa2.31□□□□□ -2.04
NF1-213ENST00000489712 GTPBP10A4D1E9 387 aaKnown RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 HTR3EA5X5Y0 456 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 NEDD8-MDP1E9PL57 170 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 PDGFBP01127 241 aaPredicted RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 GBAP04062 536 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 ANKRD34CP0C6C1 535 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 FASP25445 335 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 TNFRSF4P43489 277 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 OR3A1P47881 315 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 NPBWR1P48145 328 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 FHITP49789 147 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 PTK6Q13882 451 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 SMU1Q2TAY7 513 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 CNPY1Q3B7I2 92 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 DMKNQ6E0U4 476 aaPredicted RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 CAVIN1Q6NZI2 390 aaKnown RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 ABRAXAS1Q6UWZ7 409 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 MSANTD1Q6ZTZ1 278 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 DZIP1Q86YF9 867 aaKnown RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 C4orf19Q8IY42 314 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 TBCKQ8TEA7 893 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 SEPT8Q92599 483 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 ESAMQ96AP7 390 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 NT5DC2Q9H857 520 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 SENP1Q9P0U3 644 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 ZNF319Q9P2F9 582 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 MOSPD1Q9UJG1 213 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 KNSTRNQ9Y448 316 aa2.3□□□□□ -2.04
NF1-213ENST00000489712 COL16A1Q07092 1604 aaPredicted RBP2.3□□□□□ -2.04
NF1-213ENST00000489712 PFASO15067 1338 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 A0A0U1RQK1 487 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ILVBLA1L0T0 632 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ZNF320A2RRD8 509 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 SLC7A4O43246 635 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 TSC22D2O75157 780 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 FHP07954 510 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ODC1P11926 461 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 GDF1P27539 372 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 TIA1P31483 386 aaKnown RBP eCLIP2.29□□□□□ -2.04
NF1-213ENST00000489712 TCF7P36402 384 aaPredicted RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 MDH2P40926 338 aaKnown RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 ERVPABLB-1P60509 514 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 YWHAHQ04917 246 aaPredicted RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 SLMAPQ14BN4 828 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 MORF4L2Q15014 288 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ZNF674Q2M3X9 581 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 TWISTNBQ3B726 338 aaPredicted RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 C2orf76Q3KRA6 126 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 SLC10A5Q5PT55 438 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 KHDRBS2Q5VWX1 349 aaKnown RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 LYPLAL1Q5VWZ2 237 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ALKBH5Q6P6C2 394 aaKnown RBP2.29□□□□□ -2.04
NF1-213ENST00000489712 IYDQ6PHW0 289 aa2.29□□□□□ -2.04
NF1-213ENST00000489712 ANKRD46Q86W74 232 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms