RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CLK4Q9HAZ1 481 aaKnown RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 SEMA4GQ9NTN9 838 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SERTAD3Q9UJW9 196 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CORO2BQ9UQ03 480 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CLCA2Q9UQC9 943 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 ZNF780BQ9Y6R6 833 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SCN3AQ9NY46 2000 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 ADAMTS20P59510 1910 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CYR61O00622 381 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CHST10O43529 356 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 ATP6V1G2O95670 118 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CSNK2A2P19784 350 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 NCBP2P52298 156 aaKnown RBP eCLIP20.42■□□□□ 0.862e-17■■■■■ 76.5
SMC4-221ENST00000489573 HSPB3Q12988 150 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CEBPEQ15744 281 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 GPR155Q7Z3F1 870 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 PTRH1Q86Y79 214 aaKnown RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 NAXDQ8IW45 347 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SLITRK4Q8IW52 837 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SAMD14Q8IZD0 417 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 RCBTB1Q8NDN9 531 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 HIPK4Q8NE63 616 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 BHLHE22Q8NFJ8 381 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 OR2T12Q8NG77 320 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 FAM120BQ96EK7 910 aaKnown RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 PIF1Q9H611 641 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CXorf36Q9H7Y0 433 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 RXFP3Q9NSD7 469 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 GPR179Q6PRD1 2367 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 FAM220BPB1ANY3 271 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 H0YIG0 161 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 GPX2P18283 190 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 UQCRC2P22695 453 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 GCGRP47871 477 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 ERFP50548 548 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 ABHD18Q0P651 414 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 FXNQ16595 210 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 YOD1Q5VVQ6 348 aaPredicted RBP20.41■□□□□ 0.86
SMC4-221ENST00000489573 DHFR2Q86XF0 187 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 CALHM3Q86XJ0 350 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 CLEC4FQ8N1N0 589 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 PSMA8Q8TAA3 256 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 ADAMTS18Q8TE60 1221 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 ATOH1Q92858 354 aaPredicted RBP20.41■□□□□ 0.86
SMC4-221ENST00000489573 MMABQ96EY8 250 aaPredicted RBP20.41■□□□□ 0.86
SMC4-221ENST00000489573 HCN3Q9P1Z3 774 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 NCDNQ9UBB6 729 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 EGFL7Q9UHF1 273 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 USP22Q9UPT9 525 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 PCDHB3Q9Y5E6 796 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 SNX13Q9Y5W8 968 aa20.41■□□□□ 0.86
SMC4-221ENST00000489573 RALGAPA1Q6GYQ0 2036 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 LAMA1P25391 3075 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 RNH1P13489 461 aaKnown RBP20.4■□□□□ 0.86
SMC4-221ENST00000489573 CDK9P50750 372 aaKnown RBP20.4■□□□□ 0.86
SMC4-221ENST00000489573 GZMMP51124 257 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 OR4D2P58180 307 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 TRA2AQ13595 282 aaKnown RBP eCLIP20.4■□□□□ 0.861e-6■■■□□ 18.2
SMC4-221ENST00000489573 CSRP2Q16527 193 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 ZNF750Q32MQ0 723 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 PHF19Q5T6S3 580 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 TNIP2Q8NFZ5 429 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 OR4K14Q8NGD5 310 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 SUN3Q8TAQ9 357 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 PNPT1Q8TCS8 783 aaKnown RBP20.4■□□□□ 0.86
SMC4-221ENST00000489573 MVB12AQ96EY5 273 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 ZNF681Q96N22 645 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 NDC1Q9BTX1 674 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 TRIM15Q9C019 465 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 SIRT3Q9NTG7 399 aaPredicted RBP20.4■□□□□ 0.86
SMC4-221ENST00000489573 ACTR3BQ9P1U1 418 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 ACSL6Q9UKU0 697 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 SNX8Q9Y5X2 465 aa20.4■□□□□ 0.86
SMC4-221ENST00000489573 MYO15AQ9UKN7 3530 aa20.39■□□□□ 0.86
SMC4-221ENST00000489573 RNF103-CHMP3A0A140T963 221 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 ARPC2O15144 300 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 ZNF749O43361 778 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 LRP3O75074 770 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 LMNAP02545 664 aaKnown RBP20.39■□□□□ 0.85
SMC4-221ENST00000489573 C1QCP02747 245 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 C8orf89P0DMQ9 161 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 MPIP34949 423 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 GPC1P35052 558 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 CHI3L1P36222 383 aaPredicted RBP20.39■□□□□ 0.85
SMC4-221ENST00000489573 FEN1P39748 380 aaKnown RBP20.39■□□□□ 0.85
SMC4-221ENST00000489573 ARSFP54793 590 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 DUSP2Q05923 314 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 TTLL10Q6ZVT0 673 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 SERPINA11Q86U17 422 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 C10orf111Q8N326 155 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 METTL27Q8N6F8 245 aaPredicted RBP20.39■□□□□ 0.85
SMC4-221ENST00000489573 OR5AK3PQ8NH89 298 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 SLC26A7Q8TE54 656 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 TANKQ92844 425 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 LRGUKQ96M69 825 aa20.39■□□□□ 0.85
SMC4-221ENST00000489573 A0A1W2PS29 197 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 FAM227AF5H4B4 570 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 KRT36O76013 467 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 PSMG1O95456 288 aa20.38■□□□□ 0.85
SMC4-221ENST00000489573 KRT75O95678 551 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms