RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
MDC1-206ENST00000489540 LUZP4Q9P127 313 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 PCDHGA10Q9Y5H3 936 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 NUP210LQ5VU65 1888 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 MYOCOSA0A1B0GUC4 107 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 OR5H15A6NDH6 313 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 DYRK3O43781 588 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 AIFM1O95831 613 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 UROSP10746 265 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 CHN1P15882 459 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 HTR6P50406 440 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 TNFSF10P50591 281 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 FOXA1P55317 472 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 FOXK1P85037 733 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 ID2Q02363 134 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 SPIN4Q56A73 249 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 BEND6Q5SZJ8 279 aaPredicted RBP16.19■□□□□ 0.18
MDC1-206ENST00000489540 NDUFAF5Q5TEU4 345 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 FCRLBQ6BAA4 426 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 OR52E8Q6IFG1 317 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 EXOC3L1Q86VI1 746 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 C1orf52Q8N6N3 182 aaKnown RBP16.19■□□□□ 0.18
MDC1-206ENST00000489540 SUN3Q8TAQ9 357 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 PGM2Q96G03 612 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 EML4Q9HC35 981 aaKnown RBP16.19■□□□□ 0.18
MDC1-206ENST00000489540 ACTL7BQ9Y614 415 aa16.19■□□□□ 0.18
MDC1-206ENST00000489540 FASNP49327 2511 aaKnown RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 TNRC6AQ8NDV7 1962 aaKnown RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 TRBV11-1A0A0K0K1C0 115 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 GLOD5A6NK44 160 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 C17orf105B2RV13 164 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 NPHS1O60500 1241 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 ZFAND5O76080 213 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 WISP1O95388 367 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 ALOX15P16050 662 aaPredicted RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 MLF1P58340 268 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 PLIN5Q00G26 463 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 TNFAIP8L3Q5GJ75 292 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 RPUSD3Q6P087 351 aaKnown RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 TRIM46Q7Z4K8 759 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 ST13P4Q8IZP2 240 aaPredicted RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 BEST3Q8N1M1 668 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 ARMC10Q8N2F6 343 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 CISD2Q8N5K1 135 aaKnown RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 NCLNQ969V3 563 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 NPAS2Q99743 824 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 UTP23Q9BRU9 249 aaKnown RBP16.18■□□□□ 0.18
MDC1-206ENST00000489540 FAIM2Q9BWQ8 316 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 MCM8Q9UJA3 840 aa16.18■□□□□ 0.18
MDC1-206ENST00000489540 C1orf226A1L170 272 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 WASHC1A8K0Z3 465 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 PGRMC2O15173 223 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 PRKRAO75569 313 aaKnown RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 GALNSP34059 522 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 SERPINB5P36952 375 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 HMGCS1Q01581 520 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 ACSM2AQ08AH3 577 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 IGFBP7Q16270 282 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 FAM219BQ5XKK7 198 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 ACSM2BQ68CK6 577 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 SCIMPQ6UWF3 145 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 HSDL2Q6YN16 418 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 HORMAD2Q8N7B1 307 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 OR4K14Q8NGD5 310 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 TM4SF18Q96CE8 201 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 SNRNP40Q96DI7 357 aaKnown RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 MECRQ9BV79 373 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 SHCBP1LQ9BZQ2 653 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 OR8D2Q9GZM6 311 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 STMN4Q9H169 189 aaPredicted RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 RRAGDQ9NQL2 400 aaPredicted RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 SIRT5Q9NXA8 310 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 TEX10Q9NXF1 929 aaPredicted RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 PSME2Q9UL46 239 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 PCDHA9Q9Y5H5 950 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 COPG1Q9Y678 874 aaKnown RBP16.17■□□□□ 0.18
MDC1-206ENST00000489540 DOCK10Q96BY6 2186 aa16.17■□□□□ 0.18
MDC1-206ENST00000489540 GABRR3A8MPY1 467 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 FCHO1O14526 889 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 AZIN1O14977 448 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 TM9SF1O15321 606 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 OR10H2O60403 315 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 MAN1A2O60476 641 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 DDAH2O95865 285 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 F10P00742 488 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 BPGMP07738 259 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 FGF4P08620 206 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 PIK3R1P27986 724 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 SERPINB3P29508 390 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 CD96P40200 585 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 ETV4P43268 484 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 TUBA3CQ13748 450 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 IMPG1Q17R60 797 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 ARL13AQ5H913 290 aaPredicted RBP16.16■□□□□ 0.18
MDC1-206ENST00000489540 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 GALNT18Q6P9A2 607 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms