RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FAIMQ9NVQ4 179 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 RNF115Q9Y4L5 304 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 BZW2Q9Y6E2 419 aaKnown RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 CHCHD2Q9Y6H1 151 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 SYCE3A1L190 88 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 TMEM89A2RUT3 159 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 C17orf105B2RV13 164 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 TP53I11O14683 189 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 ZBTB14O43829 449 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 TRIM3O75382 744 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 SNX4O95219 450 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 TGFAP01135 160 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 THBDP07204 575 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 H2AFZP0C0S5 128 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 ATP5DP30049 168 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CDKN2BP42772 138 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CCR8P51685 355 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 SEMA3AQ14563 771 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 RPS6KA1Q15418 735 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CR1LQ2VPA4 569 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 E4F1Q66K89 784 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 H2AFVQ71UI9 128 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CLNKQ7Z7G1 428 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 KIAA1328Q86T90 577 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 YRDCQ86U90 279 aaKnown RBP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CILP2Q8IUL8 1156 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 SCUBE1Q8IWY4 988 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 CA13Q8N1Q1 262 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF321PQ8N8H1 164 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 GPATCH11Q8N954 259 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 SLC2A12Q8TD20 617 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 UTP15Q8TED0 518 aaKnown RBP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 PROX1Q92786 737 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 KAT2AQ92830 837 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 FAM136AQ96C01 138 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 FANCFQ9NPI8 374 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 ZNHIT6Q9NWK9 470 aaKnown RBP10.44□□□□□ -0.74
HDAC6-233ENST00000489352 C15orf41Q9Y2V0 281 aa10.44□□□□□ -0.74
HDAC6-233ENST00000489352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.44□□□□□ -0.748e-7■■■□□ 18.4
HDAC6-233ENST00000489352 VENTXO95231 258 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 FTCDO95954 541 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 CD3EP07766 207 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 RBP3P10745 1247 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 CDH1P12830 882 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 PAMP19021 973 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 PSMA3P25788 255 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 RBMXP38159 391 aaKnown RBP10.43□□□□□ -0.74
HDAC6-233ENST00000489352 SLC6A12P48065 614 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 RAB35Q15286 201 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF610Q8N9Z0 462 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 OR13J1Q8NGT2 312 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 RAB3IL1Q8TBN0 382 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 PTPMT1Q8WUK0 201 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-233ENST00000489352 TP53INP1Q96A56 240 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 RILPQ96NA2 401 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 CLCF1Q9UBD9 225 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 SLC2A6Q9UGQ3 507 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 PTBP2Q9UKA9 531 aaKnown RBP10.43□□□□□ -0.74
HDAC6-233ENST00000489352 CNOT11Q9UKZ1 510 aaKnown RBP10.43□□□□□ -0.74
HDAC6-233ENST00000489352 PROCRQ9UNN8 238 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 IKBKGQ9Y6K9 419 aa10.43□□□□□ -0.74
HDAC6-233ENST00000489352 CADP27708 2225 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 MYOCOSA0A1B0GUC4 107 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 MACROD2A1Z1Q3 448 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 ANKRD33BA6NCL7 494 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 CAPN14A8MX76 684 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 E5RI56 91 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 CD3EAPO15446 510 aaKnown RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 DYRK3O43781 588 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 THBS1P07996 1170 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 SAT1P21673 171 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 PTPN6P29350 595 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 GMPRP36959 345 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 TBPL1P62380 186 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 BTN3A2P78410 334 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 GGTLC2Q14390 218 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 FGFBP1Q14512 234 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF672Q499Z4 452 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 DARS2Q6PI48 645 aaKnown RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 ADGRE4PQ86SQ3 457 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 LINC00523Q86TU6 105 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 GPSM1Q86YR5 675 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 CDKL3Q8IVW4 592 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF595Q8IYB9 648 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 OTUD6BQ8N6M0 293 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 FAM83FQ8NEG4 500 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 OR14L1PQ8NHC6 308 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 NUBPLQ8TB37 319 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 NT5CQ8TCD5 201 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 MSI2Q96DH6 328 aaKnown RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 C11orf24Q96F05 449 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 ALOXE3Q9BYJ1 711 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 P2RY12Q9H244 342 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 UBQLN3Q9H347 655 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 NGBQ9NPG2 151 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 VTI1BQ9UEU0 232 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms