RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 TTLL10Q6ZVT0 673 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ZNF551Q7Z340 670 aaPredicted RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 SZRD1Q7Z422 152 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ARHGAP22Q7Z5H3 698 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 LRRC25Q8N386 305 aaPredicted RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 METTL27Q8N6F8 245 aaPredicted RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 RCBTB1Q8NDN9 531 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 OR4K14Q8NGD5 310 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 OR10A6Q8NH74 314 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 OR5AK3PQ8NH89 298 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PNPT1Q8TCS8 783 aaKnown RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 SLC26A7Q8TE54 656 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 TANKQ92844 425 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 NCLNQ969V3 563 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 MVB12AQ96EY5 273 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 AMDHD1Q96NU7 426 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CDC6Q99741 560 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 SPATA9Q9BWV2 254 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 RBCK1Q9BYM8 510 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 SLC7A5P2Q9GIP4 190 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PCDHAC1Q9H158 963 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 GLIPR2Q9H4G4 154 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 IKZF5Q9H5V7 419 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CXorf36Q9H7Y0 433 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 KAT8Q9H7Z6 458 aaKnown RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 SLAMF7Q9NQ25 335 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ENAMQ9NRM1 1142 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 EGFL7Q9UHF1 273 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ACSL6Q9UKU0 697 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CES1P1Q9UKY3 287 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CDC14AQ9UNH5 594 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PCDHB3Q9Y5E6 796 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CACNA1EQ15878 2313 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 KNL1Q8NG31 2342 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 A0A1B0GX78 115 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 ELOVL7A1L3X0 281 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 H0YIG0 161 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 NTN3O00634 580 aaPredicted RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 CLDN4O14493 209 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 CDX4O14627 284 aaPredicted RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 ACOT8O14734 319 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 DSCR3O14972 297 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 KRT36O76013 467 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 MED26O95402 600 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 C8orf89P0DMQ9 161 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 CD59P13987 128 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 FBLP22087 321 aaKnown RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 ALAS2P22557 587 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 HTR1EP28566 365 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 SOX11P35716 441 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 FEN1P39748 380 aaKnown RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 CRATP43155 626 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 CDK9P50750 372 aaKnown RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 XKP51811 444 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 OR4D2P58180 307 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 MS4A2Q01362 244 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 RCN1Q15293 331 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 SNCBQ16143 134 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 CCDC157Q569K6 752 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.44□□□□□ -0.9
USP11-211ENST00000489111 ERICH5Q6P6B1 374 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 BHLHB9Q6PI77 547 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 RBM44Q6ZP01 1051 aaKnown RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 TMEM126BQ8IUX1 230 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 SLITRK4Q8IW52 837 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 MICU2Q8IYU8 434 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 CLEC4FQ8N1N0 589 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 OR52N2Q8NGI0 321 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 SFXN5Q8TD22 340 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 ZFP90Q8TF47 636 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 UCN3Q969E3 161 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 MOAP1Q96BY2 351 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 ZNF501Q96CX3 271 aaPredicted RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 CNRIP1Q96F85 164 aaPredicted RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 OR6C1Q96RD1 312 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 AKAP7Q9P0M2 348 aaPredicted RBP9.44□□□□□ -0.9
USP11-211ENST00000489111 ACTR3BQ9P1U1 418 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 RARRES3Q9UL19 164 aa9.44□□□□□ -0.9
USP11-211ENST00000489111 A0A0C4DFX4 3053 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 ARHGEF17Q96PE2 2063 aaPredicted RBP9.43□□□□□ -0.9
USP11-211ENST00000489111 C4orf47A7E2U8 309 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 WASHC1A8K0Z3 465 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 FAM227AF5H4B4 570 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 H0Y3Z8 333 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 AGRPO00253 132 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 CYR61O00622 381 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 ZNF749O43361 778 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 OR10H2O60403 315 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
USP11-211ENST00000489111 DNAJB6O75190 326 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 FKBP6O75344 327 aa9.43□□□□□ -0.9
USP11-211ENST00000489111 PSMG1O95456 288 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms