RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RECKO95980 971 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CAPNS1P04632 268 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CYC1P08574 325 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 IL3P08700 152 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 BCKDHAP12694 445 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 ACPPP15309 386 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 ALOX15P16050 662 aaPredicted RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 F8A1P23610 371 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 OTX2P32243 289 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 LSP1P33241 339 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 IDH3AP50213 366 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 UCNP55089 124 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 HSD17B7P56937 341 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 RPS18P62269 152 aaKnown RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 BIKQ13323 160 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 SLC9B1Q4ZJI4 515 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 C18orf63Q68DL7 685 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 FAAH2Q6GMR7 532 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CCDC81Q6ZN84 652 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 QSOX2Q6ZRP7 698 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 IKBIPQ70UQ0 350 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 LARP4Q71RC2 724 aaKnown RBP eCLIP9.68□□□□□ -0.86
SKA1-204ENST00000488454 MED25Q71SY5 747 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CPLX4Q7Z7G2 160 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 PROSER1Q86XN7 944 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 RAB43Q86YS6 212 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 SPACA3Q8IXA5 215 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 LIX1Q8N485 282 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 PLPP5Q8NEB5 264 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 ACTRT2Q8TDY3 377 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 STARD8Q92502 1023 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 NACC2Q96BF6 587 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 C11orf24Q96F05 449 aaPredicted RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 SLC45A3Q96JT2 553 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 IP6K3Q96PC2 410 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CSF3RQ99062 836 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 PRPF18Q99633 342 aaKnown RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 C1orf50Q9BV19 199 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 VN1R1Q9GZP7 353 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 NSRP1Q9H0G5 558 aaKnown RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 TCF7L2Q9NQB0 619 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 MIEF1Q9NQG6 463 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 LANCL2Q9NS86 450 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 C19orf25Q9UFG5 118 aaPredicted RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 MAPRE3Q9UPY8 281 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 PCDHA9Q9Y5H5 950 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 MRPS18BQ9Y676 258 aaKnown RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 ZNF780BQ9Y6R6 833 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 GLOD5A6NK44 160 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 ZNF195O14628 629 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 PGRMC2O15173 223 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 UBDO15205 165 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 CNOT3O75175 753 aaKnown RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 IFNA16P05015 189 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 UMODP07911 640 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 PRR35P0CG20 571 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 C8orf89P0DMQ9 161 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 G6PDP11413 515 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 SDC1P18827 310 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 TNNI3P19429 210 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 MMP11P24347 488 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 PIK3R1P27986 724 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 RPL3P39023 403 aaKnown RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 ARFIP2P53365 341 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 BTG2P78543 158 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 RHAGQ02094 409 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 SERTAD2Q14140 314 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 FAM69BQ5VUD6 431 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 OR52E8Q6IFG1 317 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 MAVSQ7Z434 540 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 R3HCC1LQ7Z5L2 792 aaKnown RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 CLNKQ7Z7G1 428 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 SAMD14Q8IZD0 417 aaPredicted RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 OR4K14Q8NGD5 310 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 RFWD2Q8NHY2 731 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 MAELQ96JY0 434 aaKnown RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 FCRL1Q96LA6 429 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 TSSK3Q96PN8 268 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 ZNF317Q96PQ6 595 aaPredicted RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 OR52B2Q96RD2 323 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 MYNNQ9NPC7 610 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 GIMAP4Q9NUV9 329 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 TEX10Q9NXF1 929 aaPredicted RBP9.67□□□□□ -0.86
SKA1-204ENST00000488454 BAIAP2L1Q9UHR4 511 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 TRIM33Q9UPN9 1127 aa9.67□□□□□ -0.86
SKA1-204ENST00000488454 SEC16AO15027 2179 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 SDK2Q58EX2 2172 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 OR2W5A6NFC9 320 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 NKX2-8O15522 239 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 EFSO43281 561 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 AKAP10O43572 662 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 DYRK3O43781 588 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 OR10H2O60403 315 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 LDB3O75112 727 aa9.66□□□□□ -0.86
SKA1-204ENST00000488454 PRKRAO75569 313 aaKnown RBP9.66□□□□□ -0.86
SKA1-204ENST00000488454 ERAL1O75616 437 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms