RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PARP9Q8IXQ6 854 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 C16orf78Q8WTQ4 265 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 APOBEC4Q8WW27 367 aaKnown RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 ANKRD9Q96BM1 317 aaPredicted RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 KLHL29Q96CT2 875 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 TUBGCP3Q96CW5 907 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 FCRL1Q96LA6 429 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF700Q9H0M5 742 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 WDR41Q9HAD4 459 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 PNO1Q9NRX1 252 aaKnown RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 RIC8BQ9NVN3 520 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 CNTRLQ7Z7A1 2325 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 C1orf226A1L170 272 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 BLACEA4D250 179 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 SAGE2PA6NJ88 616 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 SDHDO14521 159 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 PCDH17O14917 1159 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 IFNA16P05015 189 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 ITGA3P26006 1051 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 PTGER1P34995 402 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 RRADP55042 308 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 IGLV3-21P80748 117 aaPredicted RBP10.34□□□□□ -0.75
UBE4B-210ENST00000488228 RHDQ02161 417 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF750Q32MQ0 723 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 PCSK4Q6UW60 755 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 DGAT2L6Q6ZPD8 337 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 APLFQ8IW19 511 aaPredicted RBP10.34□□□□□ -0.75
UBE4B-210ENST00000488228 KIRREL3Q8IZU9 778 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 TMEM102Q8N9M5 508 aaPredicted RBP10.34□□□□□ -0.75
UBE4B-210ENST00000488228 FNDC5Q8NAU1 212 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 CLEC1AQ8NC01 280 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 DNAJB14Q8TBM8 379 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 DOK4Q8TEW6 326 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 CKAP2Q8WWK9 683 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 GFM2Q969S9 779 aaKnown RBP10.34□□□□□ -0.75
UBE4B-210ENST00000488228 NACC2Q96BF6 587 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 PPP3R2Q96LZ3 170 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 MAGEB18Q96M61 343 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 FER1L6-AS2Q96M78 137 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 C7orf26Q96N11 449 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 TSSK3Q96PN8 268 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 LPAR4Q99677 370 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 CCT7Q99832 543 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 TUBB6Q9BUF5 446 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 FAIM2Q9BWQ8 316 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 ALOXE3Q9BYJ1 711 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 MYNNQ9NPC7 610 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 ADAP2Q9NPF8 381 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 GPR83Q9NYM4 423 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 PCDHA9Q9Y5H5 950 aa10.34□□□□□ -0.75
UBE4B-210ENST00000488228 CFAP46Q8IYW2 2715 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GOLGA8QA0A0J9YX86 632 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GOLGA8OA6NCC3 632 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GOLGA8NF8WBI6 632 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 HDAC3O15379 428 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 AKAP10O43572 662 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GUCY1B2O75343 617 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ERAL1O75616 437 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 LRATO95237 230 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GPR75O95800 540 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ITGAMP11215 1152 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 BCKDHAP12694 445 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 CCL11P51671 97 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 SLC26A5P58743 744 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 TRA2BP62995 288 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 PLIN5Q00G26 463 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GUCY1A3Q02108 690 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 DUSP2Q05923 314 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ACTN3Q08043 901 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 AIMP2Q13155 320 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 PTGR1Q14914 329 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 BTBD16Q32M84 506 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 C6orf136Q5SQH8 315 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 FAM71E1Q6IPT2 247 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ANKRD26P1Q6NSI1 321 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 SLC48A1Q6P1K1 146 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 CRLF3Q8IUI8 442 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 WDR75Q8IWA0 830 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 TMEM132CQ8N3T6 1108 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 GALNT16Q8N428 558 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 LIX1Q8N485 282 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 KIF2BQ8N4N8 673 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ARFGAP2Q8N6H7 521 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 PIWIL2Q8TC59 973 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 TANKQ92844 425 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 EXOSC8Q96B26 276 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 METTL2AQ96IZ6 378 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 THOC3Q96J01 351 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 VPS50Q96JG6 964 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 EGLN2Q96KS0 407 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 IMMP1LQ96LU5 166 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ARHGAP9Q9BRR9 750 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 NUDT9Q9BW91 350 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 WDR55Q9H6Y2 383 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 AKTIPQ9H8T0 292 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 MEAF6Q9HAF1 191 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 BAIAP2L1Q9UHR4 511 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms