RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 APPL1Q9UKG1 709 aa2.32□□□□□ -2.04
R3HDM1-219ENST00000488035 SALL1Q9NSC2 1324 aa2.32□□□□□ -2.04
R3HDM1-219ENST00000488035 TRGV8A0A0C4DH27 118 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CCDC69A6NI79 296 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 SRRM5B3KS81 715 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 SHISA9B4DS77 424 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 FBP2O00757 339 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CSDE1O75534 798 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PRDM1O75626 825 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ANXA9O76027 345 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 POP4O95707 220 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 TXNDC12O95881 172 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 TPBGLP0DKB5 382 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 VDRP11473 427 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PCP11498 1178 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CAPN2P17655 700 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CYP3A5P20815 502 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 FCGR2BP31994 310 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 FCGR2CP31995 323 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 GSK3BP49841 420 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CRYBA2P53672 197 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ERVK-16P61578 105 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 GALK2Q01415 458 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 GFPT1Q06210 699 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 SLC17A1Q14916 467 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 MS4A18Q3C1V0 323 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ALKBH5Q6P6C2 394 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 REG3GQ6UW15 175 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CD164L2Q6UWJ8 174 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 B3GLCTQ6Y288 498 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 TIPARPQ7Z3E1 657 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 RPAINQ86UA6 219 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PEX5LQ8IYB4 626 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ABHD12Q8N2K0 398 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PARP8Q8N3A8 854 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 CHDHQ8NE62 594 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 OR52E1Q8NGJ3 308 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 OR6F1Q8NGZ6 308 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 GANCQ8TET4 914 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PNPLA2Q96AD5 504 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ZNF560Q96MR9 790 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 RCHY1Q96PM5 261 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 UBE2TQ9NPD8 197 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 DEPPQ9NTK1 212 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ZNF446Q9NWS9 450 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 NDUFA13Q9P0J0 144 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 TRMT6Q9UJA5 497 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 KLK13Q9UKR3 277 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 DIMT1Q9UNQ2 313 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 ERVK-19Q9WJR5 959 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 NIP7Q9Y221 180 aaKnown RBP eCLIP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 STYXL1Q9Y6J8 313 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 PRSS21Q9Y6M0 314 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 UMODL1Q5DID0 1318 aa2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 DHX29Q7Z478 1369 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-219ENST00000488035 IGLON5A6NGN9 336 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TRAFD1O14545 582 aaPredicted RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 OGTO15294 1046 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 BCAS2O75934 225 aaPredicted RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 OR6A2O95222 327 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 SEMA4FO95754 770 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 PNPP00491 289 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 MT-ND3P03897 115 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 HCKP08631 526 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CT45A8P0DMV1 189 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CT45A9P0DMV2 189 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TRIM23P36406 574 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 ZFP36L2P47974 494 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 PRELPP51888 382 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CNN1P51911 297 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 LIMK2P53671 638 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 COX10Q12887 443 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CBX3Q13185 183 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CCL14Q16627 93 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 ECSCRQ19T08 205 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CT45A2Q5DJT8 189 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 FAAP20Q6NZ36 180 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 Q6ZRG5 221 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TOM1L2Q6ZVM7 507 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 SLC47A2Q86VL8 602 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TBC1D10CQ8IV04 446 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CCDC71Q8IV32 467 aaPredicted RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 C17orf47Q8NEP4 570 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 NEK11Q8NG66 645 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 OR4Q3Q8NH05 313 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 OR4F5Q8NH21 305 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CCDC43Q96MW1 224 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 GAL3ST4Q96RP7 486 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 SOSTQ9BQB4 213 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TRIM51Q9BSJ1 452 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 CHCHD5Q9BSY4 110 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 FUNDC2Q9BWH2 189 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 OCR1Q9BZK8 76 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 SLC26A1Q9H2B4 701 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 ADNPQ9H2P0 1102 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 TUBB1Q9H4B7 451 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 THAP9Q9H5L6 903 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 SLC25A19Q9HC21 320 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms