RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ERAL1O75616 437 aaKnown RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 PRKD3O94806 890 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 C9P02748 559 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF26P17031 533 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 ALDH4A1P30038 563 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 KDELR2P33947 212 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 BUD31P41223 144 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CRATP43155 626 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 NCBP2P52298 156 aaKnown RBP eCLIP8.91□□□□□ -0.983e-13■■□□□ 12.1
SF3B1-211ENST00000487698 AQP4P55087 323 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 OR1D5P58170 312 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CFHR1Q03591 330 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 RBBP4Q09028 425 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 GRAMD1BQ3KR37 738 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 FAM98BQ52LJ0 330 aaKnown RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 GCNT6Q5T4J0 391 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 NKAIN2Q5VXU1 208 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 OR52E8Q6IFG1 317 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 ANGPTL8Q6UXH0 198 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM64Q6YI46 380 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 C11orf65Q8NCR3 313 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 FBXO30Q8TB52 745 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 MAL2Q969L2 176 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 PPWD1Q96BP3 646 aaKnown RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CENPNQ96H22 339 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 RNF145Q96MT1 663 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 TGM7Q96PF1 710 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CHID1Q9BWS9 393 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 MAGIXQ9H6Y5 334 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CAPN10Q9HC96 672 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 STARD5Q9NSY2 213 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 MS4A12Q9NXJ0 267 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 FAF1Q9UNN5 650 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 NAALAD2Q9Y3Q0 740 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 SNX8Q9Y5X2 465 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 CCDC88CQ9P219 2028 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 LY6G6EA0A0G2JKS1 128 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 FAM149AA5PLN7 773 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF860A6NHJ4 632 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 TXNDC9O14530 226 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 B4GAT1O43505 415 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 GCM2O75603 506 aaPredicted RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 PRSS23O95084 383 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 MT-ND1P03886 318 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SEMG1P04279 462 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 ARAFP10398 606 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 HOXB6P17509 224 aaKnown RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CSNK2A2P19784 350 aaPredicted RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CPN2P22792 545 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CSF2RBP32927 897 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CNR2P34972 360 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CASP9P55211 416 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 OLR1P78380 273 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 GPLD1P80108 840 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CHRNB3Q05901 458 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 HLA-BQ31612 363 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF750Q32MQ0 723 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 LRRC23Q53EV4 343 aaPredicted RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 GATAD2AQ86YP4 633 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 EPHX4Q8IUS5 362 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CA13Q8N1Q1 262 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 OR4C6Q8NH72 309 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SFXN5Q8TD22 340 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 NCSTNQ92542 709 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SLC47A1Q96FL8 570 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 NAF1Q96HR8 494 aaKnown RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 BBS4Q96RK4 519 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 NPLQ9BXD5 320 aaPredicted RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SERHL2Q9H4I8 314 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SEMA5BQ9P283 1151 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 SAMD4AQ9UPU9 718 aaKnown RBP8.9□□□□□ -0.98
SF3B1-211ENST00000487698 ENTPD4Q9Y227 616 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 U3KQA8 63 aa8.9□□□□□ -0.98
SF3B1-211ENST00000487698 CYR61O00622 381 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 YKT6O15498 198 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 DUX1O43812 170 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 MED26O95402 600 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 ZBTB11O95625 1053 aaPredicted RBP8.9□□□□□ -0.99
SF3B1-211ENST00000487698 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.99
SF3B1-211ENST00000487698 MAGEA2P43356 314 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 CCT3P49368 545 aaKnown RBP8.9□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF630Q2M218 657 aaPredicted RBP8.9□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF528Q3MIS6 628 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 CBLL1Q75N03 491 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 CCDC80Q76M96 950 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 C6orf120Q7Z4R8 191 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 GALNT10Q86SR1 603 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 SHISA5Q8N114 240 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 HORMAD2Q8N7B1 307 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 ZBTB44Q8NCP5 570 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 EME1Q96AY2 570 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 DUSP23Q9BVJ7 150 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 FSCN3Q9NQT6 498 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 GIMAP4Q9NUV9 329 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 PSME2Q9UL46 239 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 PADI4Q9UM07 663 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms