RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 PCP4P48539 62 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 MXI1P50539 228 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 AP2B1P63010 937 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 DCDP81605 110 aaKnown RBP4.04□□□□□ -1.76
CNN3-206ENST00000487539 PDCLQ13371 301 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CUL4BQ13620 913 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 BLMHQ13867 455 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 GALNT3Q14435 633 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 ZIC1Q15915 447 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 TUBB8Q3ZCM7 444 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CHRFAM7AQ494W8 412 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 NKAIN1Q4KMZ8 207 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 INO80DQ53TQ3 878 aaPredicted RBP4.04□□□□□ -1.76
CNN3-206ENST00000487539 BRMS1LQ5PSV4 323 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 PIK3CD-AS1Q5SR53 167 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 C6orf10Q5SRN2 563 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 IRAK1BP1Q5VVH5 260 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 SPINK14Q6IE38 97 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CYB5D1Q6P9G0 228 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 ABRAXAS1Q6UWZ7 409 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CDHR3Q6ZTQ4 885 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 RRAGAQ7L523 313 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 FAM131BQ86XD5 332 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 KMT5CQ86Y97 462 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 ZNF547Q8IVP9 402 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 PRSS58Q8IYP2 241 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 PYROXD2Q8N2H3 581 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 TTC39CQ8N584 583 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 ATG16L2Q8NAA4 619 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 FAM57AQ8TBR7 257 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 TMEM174Q8WUU8 243 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 NT5C3BQ969T7 300 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CRB3Q9BUF7 120 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 MECRQ9BV79 373 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 TRIM7Q9C029 511 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 SLC7A5P2Q9GIP4 190 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 FAM234AQ9H0X4 552 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 OR2AG1Q9H205 316 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 MAGEH1Q9H213 219 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 PDFQ9HBH1 243 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 FAM207AQ9NSI2 230 aaPredicted RBP4.04□□□□□ -1.76
CNN3-206ENST00000487539 TMEM248Q9NWD8 314 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 ARMCX1Q9P291 453 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 CGNQ9P2M7 1197 aaKnown RBP4.04□□□□□ -1.76
CNN3-206ENST00000487539 UTS2RQ9UKP6 389 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 HPCAL4Q9UM19 191 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 PSMD13Q9UNM6 376 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 LAMP3Q9UQV4 416 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 SRPRBQ9Y5M8 271 aaKnown RBP4.04□□□□□ -1.76
CNN3-206ENST00000487539 DSCAMO60469 2012 aa4.04□□□□□ -1.76
CNN3-206ENST00000487539 FREM1Q5H8C1 2179 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 CXorf51AA0A1B0GTR3 108 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 ASPDHA6ND91 283 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 OR5H15A6NDH6 313 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 CD8B2A6NJW9 211 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 MCIDASD6RGH6 385 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 E7EQ34 232 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 PRR23D1E9PI22 279 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 PDXKO00764 312 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 HSF2BPO75031 334 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 MTX2O75431 263 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 PDE9AO76083 593 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 NDUFB8O95169 186 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 NTN1O95631 604 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 STATHP02808 62 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 PRR23D2P0DMB1 279 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 SLC2A4P14672 509 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 ZNF7P17097 686 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 SERPINA4P29622 427 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 RFC3P40938 356 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 GABRA4P48169 554 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 CLCNKAP51800 687 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 FOXG1P55316 489 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 GEMIN4P57678 1058 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 FAM3BP58499 235 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 HMGN5P82970 282 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 BCL2L1Q07817 233 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 TRAF2Q12933 501 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 IHHQ14623 411 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 RPS6KA2Q15349 733 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 RPE65Q16518 533 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 RBBP7Q16576 425 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 C2CD6Q53TS8 623 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 TDRD12Q587J7 1177 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 TFDP3Q5H9I0 405 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 RTL6Q6ICC9 239 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 PRSS57Q6UWY2 283 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 FAM83HQ6ZRV2 1179 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 RFX8Q6ZV50 586 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 NEK10Q6ZWH5 1172 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 BNIPLQ7Z465 357 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 ADGRG6Q86SQ4 1221 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 TRIM73Q86UV7 250 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 SLC44A2Q8IWA5 706 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 LRRC75A-AS1Q8N1F1 130 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 GHDCQ8N2G8 530 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 METTL27Q8N6F8 245 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 ARIH2OSQ8N7S6 290 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 MDS2Q8NDY4 140 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms