RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SCYL1Q96KG9 808 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 ART5Q96L15 291 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 DMRTA2Q96SC8 542 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 FAM173AQ9BQD7 235 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 VPS11Q9H270 941 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 DMRT3Q9NQL9 472 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 DEPPQ9NTK1 212 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 CPSF2Q9P2I0 782 aaKnown RBP11.54□□□□□ -0.56
SREBF1-215ENST00000487401 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
SREBF1-215ENST00000487401 HEATR5BQ9P2D3 2071 aa11.54□□□□□ -0.56
SREBF1-215ENST00000487401 IQANK1A0A1B0GTG1 560 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PINLYPA6NC86 204 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 H0YIV9 168 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PLPP1O14494 284 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 OR10H2O60403 315 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 UGDHO60701 494 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 P04436 131 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ARFIP1P53367 373 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 FOLH1Q04609 750 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ASPHQ12797 758 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PCBP2Q15366 365 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■■■□ 24.2
SREBF1-215ENST00000487401 CDSNQ15517 529 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 CPSF6Q16630 551 aaKnown RBP eCLIP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 MPEG1Q2M385 716 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 NDUFAF5Q5TEU4 345 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 CYP20A1Q6UW02 462 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 FAM47EQ6ZV65 393 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ZCCHC7Q8N3Z6 543 aaKnown RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 GOLM1Q8NBJ4 401 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ZNF721Q8TF20 911 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 IPPKQ9H8X2 491 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 WDR41Q9HAD4 459 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 SACM1LQ9NTJ5 587 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ZDHHC18Q9NUE0 388 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 LYARQ9NX58 379 aaKnown RBP11.53□□□□□ -0.56
SREBF1-215ENST00000487401 TSC22D4Q9Y3Q8 395 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 ATG4BQ9Y4P1 393 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 IKBKGQ9Y6K9 419 aa11.53□□□□□ -0.56
SREBF1-215ENST00000487401 CROCCQ5TZA2 2017 aa11.52□□□□□ -0.56
SREBF1-215ENST00000487401 LRBAP50851 2863 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 A0A1W2PRS3 328 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 HMX2A2RU54 273 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 LRRC14BA6NHZ5 514 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 NPIPA2E9PIF3 369 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 NPIPA3F8WFD2 350 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 C19orf84I3L1E1 186 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 PROM1O43490 865 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 KLK8O60259 260 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-215ENST00000487401 CLDN9O95484 217 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 GPR75O95800 540 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 INHBAP08476 426 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 RBP1P09455 135 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 FAM58BPP0C7Q3 252 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 ELAVL4P26378 380 aaKnown RBP11.52□□□□□ -0.57
SREBF1-215ENST00000487401 SSTR2P30874 369 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 KIR3DL1P43629 444 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 IGLV3-21P80748 117 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-215ENST00000487401 TNFRSF17Q02223 184 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF267Q14586 743 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-215ENST00000487401 C18orf63Q68DL7 685 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 METTL2BQ6P1Q9 378 aaKnown RBP11.52□□□□□ -0.57
SREBF1-215ENST00000487401 TAOK1Q7L7X3 1001 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 GOLGA7Q7Z5G4 137 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 NUBPLQ8TB37 319 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 SLC22A8Q8TCC7 542 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 ASB5Q8WWX0 329 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 RND1Q92730 232 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 SPOCK3Q9BQ16 436 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 CNPPD1Q9BV87 410 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 ZDHHC11Q9H8X9 412 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 IL1RL2Q9HB29 575 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 PSD3Q9NYI0 1048 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 NINJ2Q9NZG7 142 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 RNF11Q9Y3C5 154 aa11.52□□□□□ -0.57
SREBF1-215ENST00000487401 MDC1Q14676 2089 aaKnown RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 CREBBPQ92793 2442 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 GLOD5A6NK44 160 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 FOXE1O00358 373 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SMIM24O75264 130 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 EEDO75530 441 aaKnown RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 GLSO94925 669 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SIX3O95343 332 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 ALDOAP04075 364 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms