RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GPR83Q9NYM4 423 aa24.82■■□□□ 1.56
HLA-C-208ENST00000487245 UGT2A1Q9Y4X1 527 aa24.82■■□□□ 1.56
HLA-C-208ENST00000487245 KLK4Q9Y5K2 254 aa24.82■■□□□ 1.56
HLA-C-208ENST00000487245 J3KTA2 159 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 CACNB4O00305 520 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ADAM23O75077 832 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 IFNW1P05000 195 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 TRIM23P36406 574 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 TGFBR1P36897 503 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 CDC20Q12834 499 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ENPP2Q13822 863 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ZNF770Q6IQ21 691 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 FAM92BQ6ZTR7 304 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 AMER2Q8N7J2 671 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ANKRD53Q8N9V6 530 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 RGMAQ96B86 450 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 F2RL3Q96RI0 385 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ZNF717Q9BY31 904 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ZBTB20Q9HC78 741 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 PHPT1Q9NRX4 125 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 PNMA8BQ9ULN7 279 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 COL4A3Q01955 1670 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 TBX6O95947 436 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 CLCNKAP51800 687 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 ST3GAL4Q11206 333 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 UTP15Q8TED0 518 aaKnown RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 LMAN2LQ9H0V9 348 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 CXorf36Q9H7Y0 433 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 NEUROD4Q9HD90 331 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 TM7SF3Q9NS93 570 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 CUEDC1Q9NWM3 386 aaPredicted RBP24.81■■□□□ 1.56
HLA-C-208ENST00000487245 RAB23Q9ULC3 237 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 DSPPQ9NZW4 1301 aa24.81■■□□□ 1.56
HLA-C-208ENST00000487245 PDPK1O15530 556 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 TRA2BP62995 288 aaKnown RBP24.8■■□□□ 1.56
HLA-C-208ENST00000487245 PTGES3Q15185 160 aaKnown RBP24.8■■□□□ 1.56
HLA-C-208ENST00000487245 C19orf48Q6RUI8 117 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 HDDC3Q8N4P3 179 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 CDCA3Q99618 268 aaPredicted RBP24.8■■□□□ 1.56
HLA-C-208ENST00000487245 SP140LQ9H930 580 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 AMBNQ9NP70 447 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 ZDHHC4Q9NPG8 344 aa24.8■■□□□ 1.56
HLA-C-208ENST00000487245 CFAP20Q9Y6A4 193 aaKnown RBP24.8■■□□□ 1.56
HLA-C-208ENST00000487245 A0A1W2PPV9 198 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 AGAP5A6NIR3 686 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 GRXCR1A8MXD5 290 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 KCNJ13O60928 360 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 UPK1BO75841 260 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 PIPP12273 146 aaPredicted RBP24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ALDH9A1P49189 494 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 NUDT6P53370 316 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 CRISP1P54107 249 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 MANFP55145 182 aaKnown RBP24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ZNF181Q2M3W8 571 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 NUDT13Q86X67 352 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ADGRF3Q8IZF5 1079 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ST13P5Q8NFI4 369 aaPredicted RBP24.79■■□□□ 1.56
HLA-C-208ENST00000487245 FERD3LQ96RJ6 166 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 TIMM29Q9BSF4 260 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 RMI1Q9H9A7 625 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 PTHP01270 115 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 RGS6P49758 472 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 CYP4F2P78329 520 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ARMCX4Q5H9R4 360 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 FRMPD2BQ6IN97 320 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 KLHL17Q6TDP4 642 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 SLC44A2Q8IWA5 706 aaPredicted RBP24.79■■□□□ 1.56
HLA-C-208ENST00000487245 AQP11Q8NBQ7 271 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 ERLEC1Q96DZ1 483 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 RAB11FIP5Q9BXF6 653 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 MBNL1Q9NR56 388 aaKnown RBP24.79■■□□□ 1.56
HLA-C-208ENST00000487245 MS4A12Q9NXJ0 267 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 SNX8Q9Y5X2 465 aa24.79■■□□□ 1.56
HLA-C-208ENST00000487245 H7BY64 318 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 DSCR3O14972 297 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 NDUFS4O43181 175 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 CNOT3O75175 753 aaKnown RBP24.78■■□□□ 1.56
HLA-C-208ENST00000487245 ADAP00813 363 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 GRK5P34947 590 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 FRKP42685 505 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-208ENST00000487245 PRKCDQ05655 676 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 IRF4Q15306 451 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 COLEC12Q5KU26 742 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 SNX29P2Q8IUI4 249 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 MMP21Q8N119 569 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 B3GNT7Q8NFL0 401 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 TTLQ8NG68 377 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 DHRS1Q96LJ7 313 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 PRAP1Q96NZ9 151 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 TMEM121BQ9BXQ6 578 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-208ENST00000487245 NMNAT1Q9HAN9 279 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-208ENST00000487245 NDOR1Q9UHB4 597 aa24.78■■□□□ 1.56
HLA-C-208ENST00000487245 C5orf58C9J3I9 102 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CLEC3AO75596 197 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 SLC15A1P46059 708 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 LBX1P52954 281 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 INAVAQ3KP66 663 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 KIAA1161Q6NSJ0 714 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CADM3Q8N126 398 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CDADC1Q9BWV3 514 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms