RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TNFP01375 233 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 NDUFS1P28331 727 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 PIK3CBP42338 1070 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 METTL2BQ6P1Q9 378 aaKnown RBP12.61□□□□□ -0.39
HMGN1-216ENST00000486741 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 LGR4Q9BXB1 951 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 BRF2Q9HAW0 419 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 ANKHQ9HCJ1 492 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 IL1RAPQ9NPH3 570 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-216ENST00000486741 GPR83Q9NYM4 423 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 SPIN1Q9Y657 262 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-216ENST00000486741 SCN4AP35499 1836 aa12.61□□□□□ -0.39
HMGN1-216ENST00000486741 TRBV5-4A0A0C4DH59 114 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 ALPLP05186 524 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 LCKP06239 509 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PVRP15151 417 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 BIKQ13323 160 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 TRIQKQ629K1 86 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 ZNF852Q6ZMS4 543 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 METTL25Q8N6Q8 603 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 NUP43Q8NFH3 380 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PHOSPHO2Q8TCD6 241 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 UBE2FQ969M7 185 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PIP5K1AQ99755 562 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 APOOQ9BUR5 198 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 OSBPL10Q9BXB5 764 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PBX4Q9BYU1 374 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 MALT1Q9UDY8 824 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 RHPN2P1A8MT19 583 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PSIP1O75475 530 aaKnown RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 CDK5R2Q13319 367 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 SHQ1Q6PI26 577 aaKnown RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 PIWIL3Q7Z3Z3 882 aaKnown RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 NLGN4XQ8N0W4 816 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 CAMKVQ8NCB2 501 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 UHRF1Q96T88 793 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 SLC35C2Q9NQQ7 365 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 STARD5Q9NSY2 213 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 BTBD3Q9Y2F9 522 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 ST14Q9Y5Y6 855 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
HMGN1-216ENST00000486741 ASPDHA6ND91 283 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 CLDN4O14493 209 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 TALDO1P37837 337 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 SELENOWP63302 87 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 CEP68Q76N32 757 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 IQCF1Q8N6M8 205 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 C7orf57Q8NEG2 295 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 NCSTNQ92542 709 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 RDH12Q96NR8 316 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 C1QTNF3Q9BXJ4 246 aa12.6□□□□□ -0.39
HMGN1-216ENST00000486741 H0YIV9 168 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 GFYI3L273 518 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 KCNK5O95279 499 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 TCF3P15923 654 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SLC5A2P31639 672 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 PIGAP37287 484 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 NCS1P62166 190 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SMU1Q2TAY7 513 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 CPZQ66K79 652 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 IFT27Q9BW83 186 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SLC23A2Q9UGH3 650 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SLC35F4A4IF30 521 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 RPLP0P05388 317 aaKnown RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 RBBP4Q09028 425 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 GINS1Q14691 196 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 CRTC2Q53ET0 693 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 FIGNL1Q6PIW4 674 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 FAM83HQ6ZRV2 1179 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 ASPGQ86U10 573 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 LAPTM4BQ86VI4 370 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 ZNF563Q8TA94 476 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 NPLQ9BXD5 320 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 TTTY10Q9BZA0 68 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 MAGIXQ9H6Y5 334 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 LCTP09848 1927 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 OLFM2O95897 454 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 HPRP00739 348 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SLC9B2Q86UD5 537 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 CACTIN-AS1Q8N1I8 211 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 ATP6V1C2Q8NEY4 427 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 OR4K14Q8NGD5 310 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 S100ZQ8WXG8 99 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms