RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ATP4BP51164 291 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 BTG2P78543 158 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MAP7Q14244 749 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 SQLEQ14534 574 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 NKG7Q16617 165 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 UGT8Q16880 541 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FAM69BQ5VUD6 431 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FAM198BQ6UWH4 519 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 SHISA6Q6ZSJ9 500 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FUNDC1Q8IVP5 155 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 PRSS58Q8IYP2 241 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MIER2Q8N344 545 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 ANKS4BQ8N8V4 417 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 EXD3Q8N9H8 876 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC197Q8NCU1 140 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 OR9I1Q8NGQ6 314 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 STT3BQ8TCJ2 826 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 CT55Q8WUE5 264 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 DPH2Q9BQC3 489 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 DPY30Q9C005 99 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 TGIF2Q9GZN2 237 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MYLK2Q9H1R3 596 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 REEP4Q9H6H4 257 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MKKSQ9NPJ1 570 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MS4A12Q9NXJ0 267 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 C5AR2Q9P296 337 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF282Q9UDV7 671 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 MYOCOSA0A1B0GUC4 107 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 A0A1W2PS29 197 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 STMND1H3BQB6 276 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 PSMD12O00232 456 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 SLC22A3O75751 556 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 RECKO95980 971 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ALBP02768 609 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ZGLP1P0C6A0 271 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 DRD2P14416 443 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 DDCP20711 480 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 TLX1P31314 330 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 BUD31P41223 144 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 GSTM5P46439 218 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 C21orf58P58505 322 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ID2Q02363 134 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 KLF10Q13118 480 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 PDE7AQ13946 482 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 HEPACAMQ14CZ8 416 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 TGIF1Q15583 401 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF750Q32MQ0 723 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF385BQ569K4 471 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 FAM180BQ6P0A1 224 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 IKBIPQ70UQ0 350 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 MED25Q71SY5 747 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 DTX1Q86Y01 620 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 TICAM1Q8IUC6 712 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 OR4N5Q8IXE1 308 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ESX1Q8N693 406 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 NLGN4YQ8NFZ3 816 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 OR7A2PQ8NGA2 310 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 DNAJB14Q8TBM8 379 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 NKD1Q969G9 470 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ANKRD9Q96BM1 317 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 MIEF2Q96C03 454 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 OR1F2PQ96R84 312 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 FAIM2Q9BWQ8 316 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 SLC26A1Q9H2B4 701 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 SOX17Q9H6I2 414 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 RPF2Q9H7B2 306 aaKnown RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ZIM2Q9NZV7 527 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ARMCX1Q9P291 453 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 GPN3Q9UHW5 284 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ATP6V1HQ9UI12 483 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 ACSL6Q9UKU0 697 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 SPACA6W5XKT8 324 aa12.01□□□□□ -0.49
HDAC6-229ENST00000486665 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
HDAC6-229ENST00000486665 FER1L5A0AVI2 2057 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 LOC101059948A0A1B0GTJ6 334 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 C1orf226A1L170 272 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 TGFBR3LH3BV60 316 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 TERTO14746 1132 aaKnown RBP12□□□□□ -0.49
HDAC6-229ENST00000486665 SCAMP2O15127 329 aaKnown RBP12□□□□□ -0.49
HDAC6-229ENST00000486665 PRMT3O60678 531 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC22O60826 627 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CTNSO60931 367 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 LDB3O75112 727 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 LAMP1P11279 417 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 TCN2P20062 427 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 PRPS1L1P21108 318 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 IL10P22301 178 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 JAK1P23458 1154 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 F8A1P23610 371 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CD82P27701 267 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 DGKQP52824 942 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 STX1BP61266 288 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 PHC1P78364 1004 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 RHAGQ02094 409 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 OCA2Q04671 838 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 NCF4Q15080 339 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms