RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CYP2A7P20853 494 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 OTX2P32243 289 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PTGER4P35408 488 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PCK1P35558 622 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 KLK7P49862 253 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 RAB14P61106 215 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PPP1CAP62136 330 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PRKAA1Q13131 559 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ART3Q13508 389 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PTK6Q13882 451 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SPCS2Q15005 226 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 BAK1Q16611 211 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 HFEQ30201 348 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SLC9B1Q4ZJI4 515 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CRB2Q5IJ48 1285 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 DCAF10Q5QP82 559 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 RIPPLY2Q5TAB7 128 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ALS2CLQ60I27 953 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 FAM111BQ6SJ93 734 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 AFTPHQ6ULP2 937 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CERS6Q6ZMG9 384 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 BBS12Q6ZW61 710 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CYP4V2Q6ZWL3 525 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 AMZ2Q86W34 360 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 KCNMB4Q86W47 210 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 TRAPPC5Q8IUR0 188 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 DDIASQ8IXT1 998 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 RASGEF1CQ8N431 466 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ANKFN1Q8N957 763 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 BANPQ8N9N5 519 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 EIF1ADQ8N9N8 165 aaKnown RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SLC38A9Q8NBW4 561 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SETD9Q8NE22 299 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CFAP61Q8NHU2 1237 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ABHD4Q8TB40 342 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 DPF1Q92782 380 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 TSPAN17Q96FV3 270 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 RBM41Q96IZ5 413 aaKnown RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CSPG4P5Q96PW8 444 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PRPF18Q99633 342 aaKnown RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 C19orf43Q9BQ61 176 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 BTBD2Q9BX70 525 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ACTR5Q9H9F9 607 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 NTN4Q9HB63 628 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CHST11Q9NPF2 352 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 CCM2LQ9NUG4 571 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 RBM22Q9NW64 420 aaKnown RBP eCLIP6.46□□□□□ -1.381e-7■■■■■ 41.1
HDAC3-209ENST00000486618 FAM120CQ9NX05 1096 aaKnown RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 PAQR5Q9NXK6 330 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SERTAD3Q9UJW9 196 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 MYO6Q9UM54 1294 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 BTRCQ9Y297 605 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 KLF2Q9Y5W3 355 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 SHISA3A0PJX4 238 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 ANKRD34BA5PLL1 514 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 HMX3A6NHT5 357 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 AQP12BA6NM10 295 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MATN2O00339 956 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 RASGRF2O14827 1237 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 EPHB6O15197 1021 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 LDB2O43679 373 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CBR3O75828 277 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CLEC3BP05452 202 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CAPN1P07384 714 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CYC1P08574 325 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 PTAFRP25105 342 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 HNRNPH3P31942 346 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 RORAP35398 523 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 KCNC1P48547 511 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 POU3F4P49335 361 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MECP2P51608 486 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 SOX8P57073 446 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 EGR3Q06889 387 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM115Q12893 351 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 XRCC4Q13426 336 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 KRT81Q14533 505 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 RPE65Q16518 533 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MEP1BQ16820 701 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CFAP157Q5JU67 520 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 PRAMEF20Q5VT98 475 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 IRAK1BP1Q5VVH5 260 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 FCRL6Q6DN72 434 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 LCN10Q6JVE6 187 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MFSD7Q6UXD7 560 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 RBM43Q6ZSC3 357 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MSANTD1Q6ZTZ1 278 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 TMC3Q7Z5M5 1100 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MRGPREQ86SM8 312 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CUZD1Q86UP6 607 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF227Q86WZ6 799 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 LRRC6Q86X45 466 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF547Q8IVP9 402 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF679Q8IYX0 411 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 GPR26Q8NDV2 337 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 BHLHE22Q8NFJ8 381 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms