RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GLIPR2Q9H4G4 154 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 RAB23Q9ULC3 237 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 KLHL20Q9Y2M5 609 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 SNX11Q9Y5W9 270 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 HSPE1-MOB4S4R3N1 261 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 TNFRSF11BO00300 401 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 SH3BP5O60239 455 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 POLR2IP36954 125 aaKnown RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 IL1RL1Q01638 556 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 MEP1AQ16819 746 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 CTU2Q2VPK5 515 aaKnown RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 KCTD8Q6ZWB6 473 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 FLCNQ8NFG4 579 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 UCN3Q969E3 161 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 C6orf106Q9H6K1 298 aaPredicted RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 APOBEC3BQ9UH17 382 aaKnown RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 TESMINQ9Y4I5 508 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 ARHGEF17Q96PE2 2063 aaPredicted RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 B4GALT2O60909 372 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 DNAJB5O75953 348 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 PDE9AO76083 593 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 TNFP01375 233 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 BCHEP06276 602 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 IGHV4-34P06331 123 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 TNFRSF1BP20333 461 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 CERS1P27544 350 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 GPC1P35052 558 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 DGKEP52429 567 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 LSAMPQ13449 338 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 TP53BP2Q13625 1128 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 KIAA0895LQ68EN5 471 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 GPR153Q6NV75 609 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 TRIM48Q8IWZ4 208 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 OR13H1Q8NG92 308 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 SLC38A5Q8WUX1 472 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 ZFPM2Q8WW38 1151 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 GAL3ST3Q96A11 431 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 SLC35G5Q96KT7 338 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 BBS4Q96RK4 519 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 SYNPO2LQ9H987 977 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 POLR1BQ9H9Y6 1135 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 LYARQ9NX58 379 aaKnown RBP19.28■□□□□ 0.68
HPS3-206ENST00000486530 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 ZNF451Q9Y4E5 1061 aa19.28■□□□□ 0.68
HPS3-206ENST00000486530 TRBV23OR9-2A0A075B6M9 112 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 A0A1W2PR48 441 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 B4GAT1O43505 415 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 CPNE6O95741 557 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 TFPTP0C1Z6 253 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 MAGEA8P43361 318 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 OR1E2P47887 323 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 NCBP2P52298 156 aaKnown RBP eCLIP19.27■□□□□ 0.687e-8■■■■■ 26.9
HPS3-206ENST00000486530 SPIBQ01892 262 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 ROR2Q01974 943 aaKnown RBP19.27■□□□□ 0.68
HPS3-206ENST00000486530 RGS1Q08116 209 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 RAPSNQ13702 412 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 TMEM64Q6YI46 380 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 TTC29Q8NA56 475 aaPredicted RBP19.27■□□□□ 0.68
HPS3-206ENST00000486530 FLVCR1-AS1Q8TAF5 88 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 NT5CQ8TCD5 201 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 GIPC3Q8TF64 312 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 TMEM19Q96HH6 336 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 APOL4Q9BPW4 351 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 SEMA3GQ9NS98 782 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 ATG4BQ9Y4P1 393 aa19.27■□□□□ 0.68
HPS3-206ENST00000486530 GOLGA4Q13439 2230 aaKnown RBP19.27■□□□□ 0.68
HPS3-206ENST00000486530 OR2A25A4D2G3 310 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 TMEM247A6NEH6 219 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 HMGN4O00479 90 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ABCB7O75027 752 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 AIFM1O95831 613 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 CLK3P49761 638 aaKnown RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 IL5RAQ01344 420 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 VN1R4Q7Z5H5 301 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ASPGQ86U10 573 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 SMYD1Q8NB12 490 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 OR4C15Q8NGM1 316 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 SFXN5Q8TD22 340 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 GPBAR1Q8TDU6 330 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ZNF566Q969W8 418 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 OR2A14Q96R47 310 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 TUBA1CQ9BQE3 449 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 POT1Q9NUX5 634 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 EXD2Q9NVH0 621 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 C2orf42Q9NWW7 574 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ANKMY1Q9P2S6 941 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 FBXW2Q9UKT8 454 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 CA14Q9ULX7 337 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ENTPD4Q9Y227 616 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 GMPPBQ9Y5P6 360 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 CCDC88CQ9P219 2028 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 PRAMEF25A6NGN4 478 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 CHURC1-FNTBB4DL54 471 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ZNF701M0R085 212 aaPredicted RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 TNFSF14O43557 240 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 PRKRAO75569 313 aaKnown RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 CYP4B1P13584 511 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 IL9P15248 144 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 XCR1P46094 333 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms