RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 TRIM58Q8NG06 486 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 OR5L2Q8NGL0 311 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 GOT1L1Q8NHS2 421 aaPredicted RBP13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 NUBPLQ8TB37 319 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 KIAA1191Q96A73 305 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 TIMP4Q99727 224 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 MDFIQ99750 246 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 JKAMPQ9P055 326 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 CNOT11Q9UKZ1 510 aaKnown RBP13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 CORO1CQ9ULV4 474 aaPredicted RBP13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
SDCCAG3-211ENST00000486441 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 WASHC1A8K0Z3 465 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 FGF17O60258 216 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 H2AFYO75367 372 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 RAF1P04049 648 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 EPXP11678 715 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 CD53P19397 219 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 TNNI3P19429 210 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 TACR1P25103 407 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 GSTM2P28161 218 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 GGT5P36269 586 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 PEX19P40855 299 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 TRPC1P48995 793 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 HNMTP50135 292 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 STX4Q12846 297 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 E2F2Q14209 437 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.315e-6■□□□□ 8.6
SDCCAG3-211ENST00000486441 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 PRAMEF20Q5VT98 475 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 FNDC7Q5VTL7 733 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 STEAP4Q687X5 459 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 CHSY3Q70JA7 882 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 ZC3HC1Q86WB0 502 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 FBXW8Q8N3Y1 598 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 OR10G3Q8NGC4 313 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 CCT6BQ92526 530 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 ESAMQ96AP7 390 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 PPWD1Q96BP3 646 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 QPCTLQ9NXS2 382 aa13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 ZNF629Q9UEG4 869 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-211ENST00000486441 SYNDIG1LA6NDD5 238 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 DNALI1O14645 258 aaPredicted RBP13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 SCELO95171 688 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 C1QAP02745 245 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 CLPSP04118 112 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 FBXO45P0C2W1 286 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 TIMP3P35625 211 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 DUSP8Q13202 625 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 SERTAD2Q14140 314 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 DOC2AQ14183 400 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 CXorf67Q86X51 503 aaPredicted RBP13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 NKAPQ8N5F7 415 aaKnown RBP13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 ACOT4Q8N9L9 421 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 EGFL8Q99944 293 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 MS4A8Q9BY19 250 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
SDCCAG3-211ENST00000486441 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.31
SDCCAG3-211ENST00000486441 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 AHRRA9YTQ3 701 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 DVL2O14641 736 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 TP73O15350 636 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 LRATO95237 230 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 HRGP04196 525 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 INHBBP09529 407 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 SOX18P35713 384 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 ELK3P41970 407 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 STT3AP46977 705 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 KCNC1P48547 511 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 TGFBIQ15582 683 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 SPATA6LQ8N4H0 392 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 SLC15A4Q8N697 577 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 ZNF473Q8WTR7 871 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 NAT9Q9BTE0 207 aa13.08□□□□□ -0.32
SDCCAG3-211ENST00000486441 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms