RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLC12A4Q9UP95 1085 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 YARS2Q9Y2Z4 477 aaKnown RBP16.42■□□□□ 0.22
COL6A1-204ENST00000486023 TSC22D4Q9Y3Q8 395 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 PCDHGB6Q9Y5F9 930 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 SPTAN1Q13813 2472 aaKnown RBP16.42■□□□□ 0.22
COL6A1-204ENST00000486023 A0A1W2PPM1 405 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 A0A1W2PR48 441 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 A8MVJ9 347 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 DYRK3O43781 588 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 NME2P1O60361 137 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 OR4F21O95013 312 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 OTCP00480 354 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 SHBGP04278 402 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 RPS17P08708 135 aaKnown RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 NR2F6P10588 404 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 NME2P22392 152 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 TRHRP34981 398 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 STT3AP46977 705 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 PER3P56645 1201 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 MDGA2Q7Z553 956 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 HBEGFQ99075 208 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF717Q9BY31 904 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 MRPL1Q9BYD6 325 aaKnown RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 TXLNGYQ9BZA5 131 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 EPB41L4BQ9H329 900 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 HPF1Q9NWY4 346 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 LYARQ9NX58 379 aaKnown RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 AHSPQ9NZD4 102 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 PPIEQ9UNP9 301 aaKnown RBP16.41■□□□□ 0.22
COL6A1-204ENST00000486023 ASB4Q9Y574 426 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 SVILO95425 2214 aa16.41■□□□□ 0.22
COL6A1-204ENST00000486023 CPAMD8Q8IZJ3 1885 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 A0A0A6YYD5 115 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 A0A1B0GUH1 482 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 SYNDIG1LA6NDD5 238 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 TMEM200CA6NKL6 621 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 G3V3Y1 287 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 KLRC4-KLRK1H3BQV0 150 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 HRKO00198 91 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 PEX1O43933 1283 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 DLX3O60479 287 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 ZG16O60844 167 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 MLYCDO95822 493 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 PDYNP01213 254 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 STSP08842 583 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-204ENST00000486023 HSD17B3P37058 310 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 MEOX1P50221 254 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 RNF4P78317 190 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 CLCQ05315 142 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF267Q14586 743 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF750Q32MQ0 723 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 UNC50Q53HI1 259 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 CCNYL2Q5T2Q4 361 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 LETMD1Q6P1Q0 360 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 SULF2Q8IWU5 870 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 CDYL2Q8N8U2 506 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 SENP5Q96HI0 755 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-204ENST00000486023 FRMD6Q96NE9 622 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 DDX31Q9H8H2 851 aaKnown RBP16.4■□□□□ 0.22
COL6A1-204ENST00000486023 TIMMDC1Q9NPL8 285 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 MYOTQ9UBF9 498 aa16.4■□□□□ 0.22
COL6A1-204ENST00000486023 KLF13Q9Y2Y9 288 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-204ENST00000486023 CCL21O00585 134 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 PGRMC2O15173 223 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 CDC40O60508 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL6A1-204ENST00000486023 OR6B1O95007 311 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 GPR75O95800 540 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 AIFM1O95831 613 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 CLDN1O95832 211 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF24P17028 368 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 KRT15P19012 456 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 SOX3P41225 446 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 HK2P52789 917 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 HERVK_113P63132 956 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 HSF1Q00613 529 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 PLIN5Q00G26 463 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 RNFT1Q5M7Z0 435 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 TCHHL1Q5QJ38 904 aaPredicted RBP16.39■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF678Q5SXM1 525 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 MRM1Q6IN84 353 aaKnown RBP16.39■□□□□ 0.21
COL6A1-204ENST00000486023 CCNYL1Q8N7R7 359 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 OR5L2Q8NGL0 311 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF721Q8TF20 911 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 RIT1Q92963 219 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 MAGED4Q96JG8 741 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 GPR137Q96N19 417 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 TMEM237Q96Q45 408 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 ERVK-6Q9BXR3 956 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 TRIM45Q9H8W5 580 aaPredicted RBP16.39■□□□□ 0.21
COL6A1-204ENST00000486023 TEX10Q9NXF1 929 aaPredicted RBP16.39■□□□□ 0.21
COL6A1-204ENST00000486023 PSD3Q9NYI0 1048 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 SNX6Q9UNH7 406 aa16.39■□□□□ 0.21
COL6A1-204ENST00000486023 ASPDHA6ND91 283 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 WIPF3A6NGB9 483 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 TFECO14948 347 aaPredicted RBP16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ASNA1O43681 348 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 SLC19A2O60779 497 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms