RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 SYNDIG1LA6NDD5 238 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 EIF4E1BA6NMX2 242 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 GOLGA8NF8WBI6 632 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 GOLGA8RI6L899 631 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TRAFD1O14545 582 aaPredicted RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ADAMDEC1O15204 470 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 CACNG3O60359 315 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 KLHL2O95198 593 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ATP6V1G2O95670 118 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 IGLV3-25P01717 112 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 DNTTP04053 509 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 FYNP06241 537 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 BPGMP07738 259 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NR2F1P10589 423 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 IL11P20809 199 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SAT1P21673 171 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 BGNP21810 368 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 CALB2P22676 271 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 HOXC13P31276 330 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 APOBEC1P41238 236 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NDST2P52849 883 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ACLYP53396 1101 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TAS2R38P59533 333 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NCALDP61601 193 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 PRKCZQ05513 592 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 FOXM1Q08050 763 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ANKRD20A4Q4UJ75 823 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 KLHL22Q53GT1 634 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TAF1BQ53T94 588 aaPredicted RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 C6orf163Q5TEZ5 329 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 FAM91A1Q658Y4 838 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 RWDD4Q6NW29 188 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 PACS1Q6VY07 963 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ZNF534Q76KX8 674 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ASRGL1Q7L266 308 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 PRPF39Q86UA1 669 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TMEM135Q86UB9 458 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 CCDC190Q86UF4 302 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TAC4Q86UU9 113 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NUP93Q8N1F7 819 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 ACVR1CQ8NER5 493 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 RDH11Q8TC12 318 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NDRG1Q92597 394 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 CERS2Q96G23 380 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 NSL1Q96IY1 281 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 RMDN2Q96LZ7 410 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 PKMYT1Q99640 499 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 MRPL9Q9BYD2 267 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 KLHL4Q9C0H6 718 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 MMADHCQ9H3L0 296 aaPredicted RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 MRM3Q9HC36 420 aaKnown RBP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SLCO1B3Q9NPD5 702 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 GIMAP4Q9NUV9 329 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.48□□□□□ -1.69
SPTA1-207ENST00000485680 OCIAD1Q9NX40 245 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 TMEM161AQ9NX61 479 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 C1RLQ9NZP8 487 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SLC17A7Q9P2U7 560 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 BAIAP2L1Q9UHR4 511 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 PLAGL1Q9UM63 463 aa4.48□□□□□ -1.69
SPTA1-207ENST00000485680 SCN1AP35498 2009 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 FAM90A10PA6NDY2 464 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 LRRC72A6NJI9 287 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 TMEM114B3SHH9 223 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SLCO1B7G3V0H7 640 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 KCNK1O00180 336 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 DFFAO00273 331 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SMAD9O15198 467 aaKnown RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SPINT2O43291 252 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 PLOD3O60568 738 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 GLUD1P00367 558 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 JCHAINP01591 159 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 C1QAP02745 245 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SERPINE1P05121 402 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 IGHV4-30-4P0DP06 118 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 ZNF12P17014 697 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 HOXB8P17481 243 aaPredicted RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 CRABP2P29373 138 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 BRCC3P46736 316 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 OR1G1P47890 313 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 LIMK2P53671 638 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 PNLIPRP2P54317 469 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 RPL10AP62906 217 aaKnown RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 PPP2R2BQ00005 443 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 DSC1Q08554 894 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 MAD2L1Q13257 205 aaPredicted RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 EIF4EBP2Q13542 120 aaPredicted RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 HNRNPDQ14103 355 aaKnown RBP4.47□□□□□ -1.69
SPTA1-207ENST00000485680 CHI3L2Q15782 390 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 DECR1Q16698 335 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 DNAL1Q4LDG9 190 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 ATP13A5Q4VNC0 1218 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 SLC39A12Q504Y0 691 aa4.47□□□□□ -1.69
SPTA1-207ENST00000485680 FASTKD1Q53R41 847 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms