RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HTD2P86397 168 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 PPP1R8Q12972 351 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 KIAA0141Q14154 515 aaPredicted RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 RNF212Q495C1 297 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 ATP1A1-AS1Q5TC04 95 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 MFSD7Q6UXD7 560 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 MACC1Q6ZN28 852 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 LAX1Q8IWV1 398 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 THEM5Q8N1Q8 247 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 Q8N7P7 452 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 SIDT2Q8NBJ9 832 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 U2AF1L4Q8WU68 220 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 PRCCQ92733 491 aaPredicted RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 SLCO4A1Q96BD0 722 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 CYYR1Q96J86 154 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 C16orf45Q96MC5 204 aaPredicted RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 NSMCE2Q96MF7 247 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 GUCD1Q96NT3 240 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 DDX50Q9BQ39 737 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 LRRC2Q9BYS8 371 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 DDX47Q9H0S4 455 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 ATG10Q9H0Y0 220 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 RAVER2Q9HCJ3 691 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 PHPT1Q9NRX4 125 aaPredicted RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 ZCCHC3Q9NUD5 404 aaKnown RBP3.24□□□□□ -1.89
SMC4-215ENST00000484799 TBC1D13Q9NVG8 400 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 TAS2R3Q9NYW6 316 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 NINJ2Q9NZG7 142 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 B4GALT7Q9UBV7 327 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 TEKT2Q9UIF3 430 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 KCNK6Q9Y257 313 aa3.24□□□□□ -1.89
SMC4-215ENST00000484799 RNF123Q5XPI4 1314 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 NDC80O14777 642 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 REC8O95072 547 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 TRIM16O95361 564 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 SLC4A1P02730 911 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 RPLP0P05388 317 aaKnown RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 GSTA2P09210 222 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 DLATP10515 647 aaKnown RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 CYP3A5P20815 502 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ACP1P24666 158 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 SMSP52788 366 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 SSTP61278 116 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 TRA2AQ13595 282 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMC4-215ENST00000484799 RFTN1Q14699 578 aaPredicted RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 C3AR1Q16581 482 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 HSP90AA5PQ58FG0 334 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 TEX35Q5T0J7 233 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 BAIAP2L2Q6UXY1 529 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 TMUB2Q71RG4 321 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 CPEB2Q7Z5Q1 589 aaKnown RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 PHC2Q8IXK0 858 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 FBXW8Q8N3Y1 598 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ARL6IP6Q8N6S5 226 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 RNF149Q8NC42 400 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 LEMD2Q8NC56 503 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 RPLP0P6Q8NHW5 317 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 RFT1Q96AA3 541 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 C14orf79Q96F83 325 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 C1orf147Q96MC9 270 aaPredicted RBP3.23□□□□□ -1.89
SMC4-215ENST00000484799 ACPTQ9BZG2 426 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 LRRCC1Q9C099 1032 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 EGLN3Q9H6Z9 239 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 VIPAS39Q9H9C1 493 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ABCD2Q9UBJ2 740 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 FBXL4Q9UKA2 621 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ERVK-19Q9WJR5 959 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ATP6V0A2Q9Y487 856 aa3.23□□□□□ -1.89
SMC4-215ENST00000484799 ZNF840PA6NDX5 716 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 CFAP73A6NFT4 308 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 H0YIG0 161 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SLC28A1O00337 649 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 CPLX1O14810 134 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 PHF1O43189 567 aaPredicted RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 ACSL4O60488 711 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 NOL3O60936 208 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 ATP6V1G1O75348 118 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 MT-ATP6P00846 226 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 PGK2P07205 417 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SFTPBP07988 381 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SERPINF2P08697 491 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 ETS1P14921 441 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 CCND2P30279 289 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SFNP31947 248 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 STIP1P31948 543 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 NSFP46459 744 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 NUMBP49757 651 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 NDST2P52849 883 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 GMFBP60983 142 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 FKBP1BP68106 108 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 GALK2Q01415 458 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 TAF7Q15545 349 aaPredicted RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 ZNF542PQ5EBM4 170 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 DNAJC21Q5F1R6 531 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 C12orf60Q5U649 245 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 AGAP7PQ5VUJ5 663 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms