RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 FBXO30Q8TB52 745 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SLC47A1Q96FL8 570 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 BBS4Q96RK4 519 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 MAPKAP1Q9BPZ7 522 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 C9orf16Q9BUW7 83 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SIRT3Q9NTG7 399 aaPredicted RBP24.81■■□□□ 1.56
SHOX2-204ENST00000483851 KCMF1Q9P0J7 381 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 C5AR2Q9P296 337 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF639Q9UID6 485 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 PILRBQ9UKJ0 227 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SMIM31A0A1B0GVY4 71 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 DEAF1O75398 565 aaPredicted RBP24.8■■□□□ 1.56
SHOX2-204ENST00000483851 PRKD3O94806 890 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 TLX1P31314 330 aaPredicted RBP24.8■■□□□ 1.56
SHOX2-204ENST00000483851 GPR3P46089 330 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 RPL5P46777 297 aaKnown RBP24.8■■□□□ 1.56
SHOX2-204ENST00000483851 TNFRSF17Q02223 184 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 SLC25A45Q8N413 288 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 DNAJC22Q8N4W6 341 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 NCSTNQ92542 709 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 ZDHHC12Q96GR4 267 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 NPLQ9BXD5 320 aaPredicted RBP24.8■■□□□ 1.56
SHOX2-204ENST00000483851 GLIPR2Q9H4G4 154 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 SEMA3GQ9NS98 782 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 DAPP1Q9UN19 280 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 SNX8Q9Y5X2 465 aa24.8■■□□□ 1.56
SHOX2-204ENST00000483851 TLCD2A6NGC4 264 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PGRMC2O15173 223 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 TPST1O60507 370 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PRAMEF10O60809 474 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 CSNK2A2P19784 350 aaPredicted RBP24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PRIM2P49643 509 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PLK5Q496M5 336 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 DEFB134Q4QY38 66 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 NIPAL1Q6NVV3 410 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 ENPP6Q6UWR7 440 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 RNF130Q86XS8 419 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 ZCCHC10Q8TBK6 192 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 MOAP1Q96BY2 351 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 THUMPD1Q9NXG2 353 aaKnown RBP24.79■■□□□ 1.56
SHOX2-204ENST00000483851 NDUFA13Q9P0J0 144 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 SPACA6W5XKT8 324 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 SLC9B1P1A6NJY1 282 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PRSS23O95084 383 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 RASAL1O95294 804 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 MPIP34949 423 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 CSTF1Q05048 431 aaKnown RBP24.79■■□□□ 1.56
SHOX2-204ENST00000483851 HSPB3Q12988 150 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 NR1D2Q14995 579 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 COX20Q5RI15 118 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 C18orf63Q68DL7 685 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 BHLHB9Q6PI77 547 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 MAML2Q8IZL2 1156 aaPredicted RBP24.79■■□□□ 1.56
SHOX2-204ENST00000483851 SFXN5Q8TD22 340 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 FAM60AQ9NP50 221 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 LRIT1Q9P2V4 623 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 RAPGEFL1Q9UHV5 662 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF780BQ9Y6R6 833 aa24.79■■□□□ 1.56
SHOX2-204ENST00000483851 PLOD2O00469 737 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CLOCKO15516 846 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 PGM3O95394 542 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CLPTM1O96005 669 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 EIF2S1P05198 315 aaKnown RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 ETFAP13804 333 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 GLB1P16278 677 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CPN2P22792 545 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 LIM2P55344 173 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 VSX2P58304 361 aaPredicted RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CNPY1Q3B7I2 92 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 TMTC4Q5T4D3 741 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 PEAR1Q5VY43 1037 aaPredicted RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CBLL1Q75N03 491 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CCDC80Q76M96 950 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 EIF3MQ7L2H7 374 aaKnown RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 MCATQ8IVS2 390 aaKnown RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 OR5AK3PQ8NH89 298 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 KLHL6Q8WZ60 621 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 UCN3Q969E3 161 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 CNRIP1Q96F85 164 aaPredicted RBP24.78■■□□□ 1.56
SHOX2-204ENST00000483851 MAP3K3Q99759 626 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 IL21RQ9HBE5 538 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 FBXO4Q9UKT5 387 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 ACSL6Q9UKU0 697 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 OAZ3Q9UMX2 235 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 RNF215Q9Y6U7 377 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 V9GYQ6 96 aa24.78■■□□□ 1.56
SHOX2-204ENST00000483851 PDLIM1O00151 329 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 AHCYL1O43865 530 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SH3BP5O60239 455 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 NUDT7P0C024 238 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 CCT3P49368 545 aaKnown RBP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 NCBP2P52298 156 aaKnown RBP eCLIP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SKP1P63208 163 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 BNC1Q01954 994 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SPIDRQ14159 915 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SPDYE7PQ495Y7 208 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SATL1Q86VE3 508 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ZC3H10Q96K80 434 aaKnown RBP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ASPSCR1Q9BZE9 553 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 MAP4K5Q9Y4K4 846 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms