RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SIT1Q9Y3P8 196 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 RIF1Q5UIP0 2472 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPTBP11277 2137 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPAG17Q6Q759 2223 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 A0A1W2PR77 199 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ENO4A6NNW6 628 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 B4DGG1 531 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 M0QX08 132 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 NME6O75414 186 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ERAL1O75616 437 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PGM3O95394 542 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CTSEP14091 401 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 UQCRC2P22695 453 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PPIBP23284 216 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 POLR2IP36954 125 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR1E2P47887 323 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PPP2R2BQ00005 443 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 HHEXQ03014 270 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAPK11Q15759 364 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TRIM40Q6P9F5 258 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 FIGLAQ6QHK4 219 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRSS41Q7RTY9 318 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZC3H7AQ8IWR0 971 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEFF1Q8IYR6 380 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPEM1Q8N4L4 309 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 UTP15Q8TED0 518 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZFAND2BQ8WV99 257 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CYGBQ8WWM9 190 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 KLHL6Q8WZ60 621 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5P2Q8WZ92 322 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 RAB8BQ92930 207 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC22A18Q96BI1 424 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TM4SF19Q96DZ7 209 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC35C2Q9NQQ7 365 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 POT1Q9NUX5 634 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CES1P1Q9UKY3 287 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CORO2BQ9UQ03 480 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 MRPS2Q9Y399 296 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CABIN1Q9Y6J0 2220 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRAMEF27A3QJZ7 478 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 GNGT2O14610 69 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PROM1O43490 865 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CD27P26842 260 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PIGAP37287 484 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 FEN1P39748 380 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRIM2P49643 509 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ALDH3A2P51648 485 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAZP56270 477 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPS15AP62244 130 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TRA2BP62995 288 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CDK6Q00534 326 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 FADDQ13158 208 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SCARB2Q14108 478 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 DAG1Q14118 895 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAP7Q14244 749 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 DEFB134Q4QY38 66 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 GCNT6Q5T4J0 391 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SAXO2Q658L1 398 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TSSK4Q6SA08 328 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CEACAM20Q6UY09 585 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 C6orf120Q7Z4R8 191 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ASPGQ86U10 573 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 LSM14AQ8ND56 463 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZCCHC10Q8TBK6 192 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZDHHC1Q8WTX9 485 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC38A5Q8WUX1 472 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 NEURL3Q96EH8 262 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZBED6CLQ96FA7 236 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 OTUB1Q96FW1 271 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 OSBPL10Q9BXB5 764 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM38AQ9H6F2 299 aa8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 PTPRZ1P23471 2315 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 EP300Q09472 2414 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-204ENST00000483763 DCHS1Q96JQ0 3298 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 KIR2DS5A0A0G2JLQ3 304 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 A0A0G2JNG1 304 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 KIR2DS3K7RE56 304 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SUV39H1O43463 412 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CSF2P04141 144 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TFAP2AP05549 437 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMIM10L1P0DMW3 83 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 DRD2P14416 443 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ATP6V1B1P15313 513 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 BCKDHBP21953 392 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 GSTM2P28161 218 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CD38P28907 300 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 PCBP3P57721 371 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SELENOWP63302 87 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OLR1P78380 273 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ADARB1P78563 741 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ROR2Q01974 943 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPL6Q02878 288 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 DMWDQ09019 674 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms