RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 WASHC1A8K0Z3 465 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 STK16O75716 305 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 TGFB1P01137 390 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 CD99P14209 185 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 CD1DP15813 335 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 CPN2P22792 545 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 UQCRC1P31930 480 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 SLC12A2P55011 1212 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 KCNJ2P63252 427 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 FRG1Q14331 258 aaKnown RBP12.82□□□□□ -0.36
VARS-226ENST00000483275 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
VARS-226ENST00000483275 WLSQ5T9L3 541 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 C18orf63Q68DL7 685 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 TMEM64Q6YI46 380 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 RGS9BPQ6ZS82 235 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 SEM1Q6ZVN7 128 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 ZBED8Q8IZ13 594 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 RELL2Q8NC24 303 aaPredicted RBP12.82□□□□□ -0.36
VARS-226ENST00000483275 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 FAM13CQ8NE31 585 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 OR10G3Q8NGC4 313 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 LRRC39Q96DD0 335 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 SENP5Q96HI0 755 aaPredicted RBP12.82□□□□□ -0.36
VARS-226ENST00000483275 DGAT2Q96PD7 388 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 OR51B5Q9H339 312 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 LYRM4Q9HD34 91 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 IGSF5Q9NSI5 407 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 CRIM1Q9NZV1 1036 aa12.82□□□□□ -0.36
VARS-226ENST00000483275 NSD1Q96L73 2696 aaPredicted RBP12.82□□□□□ -0.36
VARS-226ENST00000483275 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 CTAG2O75638 210 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 HIST1H1TP22492 207 aaPredicted RBP12.81□□□□□ -0.36
VARS-226ENST00000483275 GSTM2P28161 218 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SSTR1P30872 391 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 GGT5P36269 586 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 RPL21P46778 160 aaKnown RBP12.81□□□□□ -0.36
VARS-226ENST00000483275 IRF8Q02556 426 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 FOLH1Q04609 750 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 TGM3Q08188 693 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SERTAD2Q14140 314 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 RCN2Q14257 317 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SLC10A1Q14973 349 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 PIGGQ5H8A4 983 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 BICRALQ6AI39 1079 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SULT1C3Q6IMI6 304 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 ARSKQ6UWY0 536 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 OR5L2Q8NGL0 311 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 OR8K3Q8NH51 312 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 ZNF473Q8WTR7 871 aaKnown RBP12.81□□□□□ -0.36
VARS-226ENST00000483275 KIAA1191Q96A73 305 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 WDR34Q96EX3 536 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 DOCK7Q96N67 2140 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 KRT12Q99456 494 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 EFCAB11Q9BUY7 163 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 EHD1Q9H4M9 534 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 ALG9Q9H6U8 611 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 CNOT10Q9H9A5 744 aaKnown RBP12.81□□□□□ -0.36
VARS-226ENST00000483275 PROK2Q9HC23 129 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SH2D2AQ9NP31 389 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 RNF112Q9ULX5 631 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 SNX24Q9Y343 169 aa12.81□□□□□ -0.36
VARS-226ENST00000483275 A0A1W2PS29 197 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 CES2O00748 559 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 SUSD5O60279 629 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 WDR1O75083 606 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 FAM155BO75949 473 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 S100BP04271 92 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 COX7A2P14406 83 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 KLK2P20151 261 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 BMP5P22003 454 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 STT3AP46977 705 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 HNRNPH2P55795 449 aaKnown RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 GNG11P61952 73 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 HERVK_113P63132 956 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 ERVK-8P63133 956 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 POU4F1Q01851 419 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 DLG1Q12959 904 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 SLC25A35Q3KQZ1 300 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 ULK2Q8IYT8 1036 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 TCAIMQ8N3R3 496 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 PDPRQ8NCN5 879 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 UCN3Q969E3 161 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 SARAFQ96BY9 339 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 SPACA9Q96E40 222 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 TBCDQ9BTW9 1192 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 ERVK-6Q9BXR3 956 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 PHACTR1Q9C0D0 580 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 PITHD1Q9GZP4 211 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 CLEC4MQ9H2X3 399 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 GSX1Q9H4S2 264 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 POPDC3Q9HBV1 291 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 ST6GALNAC2Q9UJ37 374 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms