RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CD300CQ08708 224 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 SLC17A1Q14916 467 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 DCAF12Q5T6F0 453 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 METTL7BQ6UX53 244 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 TBC1D10CQ8IV04 446 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 OR52E1Q8NGJ3 308 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 URGCPQ8TCY9 931 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PNPLA2Q96AD5 504 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 RCHY1Q96PM5 261 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 TAAR6Q96RI8 345 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 TNFRSF13CQ96RJ3 184 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 SLC26A1Q9H2B4 701 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 NMUR1Q9HB89 426 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PAK5Q9P286 719 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 TRIM10Q9UDY6 481 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 MRTO4Q9UKD2 239 aaKnown RBP4.63□□□□□ -1.67
SF3B1-210ENST00000482158 LOC390937A0A1W2PQ73 354 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 CCDC69A6NI79 296 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 SLC9B1P1A6NJY1 282 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 ZBTB14O43829 449 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 KIAA0513O60268 411 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 SERPINB2P05120 415 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 ADORA3P0DMS8 318 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 RPL9P32969 192 aaKnown RBP4.62□□□□□ -1.67
SF3B1-210ENST00000482158 TKTL1P51854 596 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 LIMK2P53671 638 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 PEX3P56589 373 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 ITPK1Q13572 414 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 TSTA3Q13630 321 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-210ENST00000482158 KRT31Q15323 416 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 PAQR6Q6TCH4 344 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 DLEU7Q6UYE1 221 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 GPRIN3Q6ZVF9 776 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 RPAINQ86UA6 219 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 PHC2Q8IXK0 858 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 PARP8Q8N3A8 854 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 GVQW1Q8N7I0 195 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 OR6M1Q8NGM8 313 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 GOLGA5Q8TBA6 731 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 NPRL2Q8WTW4 380 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 ATOH8Q96SQ7 321 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 NAP1L3Q99457 506 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF577Q9BSK1 485 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 FUNDC2Q9BWH2 189 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 TUBB1Q9H4B7 451 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 GDF3Q9NR23 364 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 DEPPQ9NTK1 212 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 THYN1Q9P016 225 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 DIMT1Q9UNQ2 313 aaKnown RBP4.62□□□□□ -1.67
SF3B1-210ENST00000482158 MRPS2Q9Y399 296 aaKnown RBP4.62□□□□□ -1.67
SF3B1-210ENST00000482158 SALL1Q9NSC2 1324 aa4.62□□□□□ -1.67
SF3B1-210ENST00000482158 MACROD2A1Z1Q3 448 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 IGLON5A6NGN9 336 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 FRAT2O75474 233 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 ANXA9O76027 345 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 POP4O95707 220 aaKnown RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 IGHG1P01857 330 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF10P21506 573 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TNFRSF4P43489 277 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 NSFP46459 744 aaKnown RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 CASP9P55211 416 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 SRPXP78539 464 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 P2RY14Q15391 338 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 SIX1Q15475 284 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 POM121L1PQ3SYA9 428 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 MPPE1Q53F39 396 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 ETFRF1Q6IPR1 90 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TATDN1Q6P1N9 297 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 ADAMTSL2Q86TH1 951 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 ABHD12Q8N2K0 398 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 RELL2Q8NC24 303 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TMEM185AQ8NFB2 350 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TCP11Q8WWU5 503 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 RAB39BQ96DA2 213 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 EGLN1Q9GZT9 426 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 GNB4Q9HAV0 340 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 KLK13Q9UKR3 277 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TSPAN16Q9UKR8 245 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 SPAG9O60271 1321 aaKnown RBP4.61□□□□□ -1.67
SF3B1-210ENST00000482158 NPC1L1Q9UHC9 1359 aa4.61□□□□□ -1.67
SF3B1-210ENST00000482158 TRGV8A0A0C4DH27 118 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 TRBV2A0A0J9YWF9 115 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 YJEFN3A6XGL0 299 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 NEDD8-MDP1E9PL57 170 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 LRP3O75074 770 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 CRLF1O75462 422 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 SFTPBP07988 381 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 AHCYP23526 432 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 HNRNPFP52597 415 aaKnown RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 SLC12A3P55017 1021 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 GEMP55040 296 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 STARD6P59095 220 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 SRP54P61011 504 aaKnown RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 EXOSC7Q15024 291 aaKnown RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 LPAL2Q16609 132 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 ECSCRQ19T08 205 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 NKAIN2Q5VXU1 208 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms