RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MTERF1Q99551 399 aaKnown RBP14.12□□□□□ -0.15
LIMS3-203ENST00000480744 FAM173AQ9BQD7 235 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 CENPKQ9BS16 269 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 ACTR8Q9H981 624 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 PLSCR2Q9NRY7 297 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 SACM1LQ9NTJ5 587 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 TEP1Q99973 2627 aaKnown RBP14.12□□□□□ -0.15
LIMS3-203ENST00000480744 OTOGQ6ZRI0 2925 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 NINQ8N4C6 2090 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 POLQO75417 2590 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 A0A087X1B8 175 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 SYCE1LA8MT33 242 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 DYRK3O43781 588 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ZNF354AO60765 605 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-203ENST00000480744 SCELO95171 688 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 P04436 131 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 CNR1P21554 472 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 STT3AP46977 705 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 DNASE1L1P49184 302 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ASPHQ12797 758 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 PFKFB4Q16877 469 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 FAM83EQ2M2I3 478 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 MROH9Q5TGP6 573 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 C18orf63Q68DL7 685 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 RGS9BPQ6ZS82 235 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 GPR180Q86V85 440 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 CENPLQ8N0S6 344 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-203ENST00000480744 RPRMLQ8N4K4 120 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 OR5M9Q8NGP3 310 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 OR5M3Q8NGP4 307 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ZNF721Q8TF20 911 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ASB5Q8WWX0 329 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 RND1Q92730 232 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 PPWD1Q96BP3 646 aaKnown RBP14.11□□□□□ -0.15
LIMS3-203ENST00000480744 SENP5Q96HI0 755 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-203ENST00000480744 SMC6Q96SB8 1091 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 SPOCK3Q9BQ16 436 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 RPF2Q9H7B2 306 aaKnown RBP14.11□□□□□ -0.15
LIMS3-203ENST00000480744 DMRT3Q9NQL9 472 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ADGRE2Q9UHX3 823 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 PHF11Q9UIL8 331 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 RNF6Q9Y252 685 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 LIPGQ9Y5X9 500 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 FREM3P0C091 2139 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 TACC2O95359 2948 aa14.11□□□□□ -0.15
LIMS3-203ENST00000480744 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 NKX2-6A6NCS4 301 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 LRRC14BA6NHZ5 514 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 PLPP1O14494 284 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 PRKRAO75569 313 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 C2P06681 752 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 CCL3P10147 92 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 MTHFD2P13995 350 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 TLX1P31314 330 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ARL1P40616 181 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 MAGEA5P43359 124 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 HNRNPH2P55795 449 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 RPS13P62277 151 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 PHEXP78562 749 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 PLIN5Q00G26 463 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 TNFRSF17Q02223 184 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 FOLH1Q04609 750 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 TLE4Q04727 773 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 SETDB1Q15047 1291 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 EMC4Q5J8M3 183 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 NDUFAF5Q5TEU4 345 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ZNF585AQ6P3V2 769 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 DGAT2L6Q6ZPD8 337 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 FAM109AQ8N4B1 249 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 TMEM251Q8N6I4 163 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 GOLM1Q8NBJ4 401 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 C7orf57Q8NEG2 295 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 RBM18Q96H35 190 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 CNPPD1Q9BV87 410 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ZDHHC11Q9H8X9 412 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 IL1RL2Q9HB29 575 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 SNX15Q9NRS6 342 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 PNPLA3Q9NST1 481 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 MS4A12Q9NXJ0 267 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 CPSF2Q9P2I0 782 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ATG4BQ9Y4P1 393 aa14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ANKRD17O75179 2603 aaKnown RBP14.1□□□□□ -0.15
LIMS3-203ENST00000480744 ARHGAP21Q5T5U3 1957 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 HRKO00198 91 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 GLSO94925 669 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-203ENST00000480744 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-203ENST00000480744 CHRNB4P30926 498 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 PIGAP37287 484 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 BUD31P41223 144 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-203ENST00000480744 PIK3CBP42338 1070 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 NUP107P57740 925 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 KRTAP10-9P60411 292 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 IGLV3-21P80748 117 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-203ENST00000480744 SLC7A5Q01650 507 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
LIMS3-203ENST00000480744 PMPCAQ10713 525 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms