RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 CGREF1Q99674 301 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 SH3GL1Q99961 368 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 DPH2Q9BQC3 489 aaPredicted RBP11.86□□□□□ -0.51
SIK3-209ENST00000480222 ZPBPQ9BS86 351 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 DDA1Q9BW61 102 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 PAIP1Q9H074 479 aaKnown RBP11.86□□□□□ -0.51
SIK3-209ENST00000480222 ZNF304Q9HCX3 659 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 TAS2R9Q9NYW1 312 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 C5AR2Q9P296 337 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 ABCD2Q9UBJ2 740 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 DHCR7Q9UBM7 475 aaKnown RBP11.86□□□□□ -0.51
SIK3-209ENST00000480222 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 MMACHCQ9Y4U1 282 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 PCDHGA7Q9Y5G6 932 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 GMEB1Q9Y692 573 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 ZNF780BQ9Y6R6 833 aa11.86□□□□□ -0.51
SIK3-209ENST00000480222 GLOD5A6NK44 160 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 MYO1GB0I1T2 1018 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CLDN4O14493 209 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 PGRMC2O15173 223 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 GSC2O15499 205 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 ERAL1O75616 437 aaKnown RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 ANP32DO95626 131 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 ONECUT2O95948 504 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 FHP07954 510 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 IFI6P09912 130 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CEACAM1P13688 526 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CSNK2A2P19784 350 aaPredicted RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 ALAS2P22557 587 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 PPIBP23284 216 aaKnown RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 SLC6A2P23975 617 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 MPIP34949 423 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 XCR1P46094 333 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 HSD17B7P56937 341 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 SAMD4BQ5PRF9 694 aaKnown RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 RAB11FIP2Q7L804 512 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CLECL1Q8IZS7 167 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 LRRC25Q8N386 305 aaPredicted RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 KIF2BQ8N4N8 673 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 METTL27Q8N6F8 245 aaPredicted RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 OR4K14Q8NGD5 310 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 OR4A15Q8NGL6 344 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 OR51Q1Q8NH59 317 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 PSMA8Q8TAA3 256 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CLIP3Q96DZ5 547 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 PEX11GQ96HA9 241 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 ANKRD27Q96NW4 1050 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 BBS4Q96RK4 519 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 ASPSCR1Q9BZE9 553 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 IL1RL2Q9HB29 575 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 MKKSQ9NPJ1 570 aaPredicted RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 SEMA3GQ9NS98 782 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 C14orf105Q9NVL8 296 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 SLC39A1Q9NY26 324 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
SIK3-209ENST00000480222 CORO2BQ9UQ03 480 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 NEUROG3Q9Y4Z2 214 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 SCN3AQ9NY46 2000 aa11.85□□□□□ -0.51
SIK3-209ENST00000480222 SLC30A4O14863 429 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 NVLO15381 856 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 TIAF1O95411 115 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 GPR75O95800 540 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 C6orf47O95873 294 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 JMJD7P0C870 316 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 PTPN6P29350 595 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 RORAP35398 523 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 PGM1P36871 562 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 CDKN2CP42773 168 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 NCBP2P52298 156 aaKnown RBP eCLIP11.84□□□□□ -0.51
SIK3-209ENST00000480222 SLC7A2P52569 658 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 MANFP55145 182 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 HBA1P69905 142 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 SIM1P81133 766 aaPredicted RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 MAT1AQ00266 395 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 ABHD18Q0P651 414 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 BIKQ13323 160 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 CAPRIN1Q14444 709 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 DCAF12Q5T6F0 453 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 PRAMEF17Q5VTA0 474 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 ZNF385CQ66K41 422 aaPredicted RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 CPZQ66K79 652 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 TMEM64Q6YI46 380 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 QSOX2Q6ZRP7 698 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 SCUBE1Q8IWY4 988 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 ULK2Q8IYT8 1036 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 WDR36Q8NI36 951 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 FKBP10Q96AY3 582 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 MOAP1Q96BY2 351 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 MIEF2Q96C03 454 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 CNRIP1Q96F85 164 aaPredicted RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 ZNF681Q96N22 645 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 AMDHD1Q96NU7 426 aa11.84□□□□□ -0.51
SIK3-209ENST00000480222 PELOQ9BRX2 385 aaKnown RBP11.84□□□□□ -0.51
SIK3-209ENST00000480222 SLC39A3Q9BRY0 314 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms