RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 TRIM39Q9HCM9 518 aa8.29□□□□□ -1.08
PKP4-210ENST00000480171 DDX28Q9NUL7 540 aaKnown RBP8.29□□□□□ -1.08
PKP4-210ENST00000480171 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
PKP4-210ENST00000480171 FBXL12Q9NXK8 326 aa8.29□□□□□ -1.08
PKP4-210ENST00000480171 RPL36Q9Y3U8 105 aaKnown RBP8.29□□□□□ -1.08
PKP4-210ENST00000480171 PIPSLA2A3N6 862 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SAP18O00422 153 aaKnown RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 RGS13O14921 159 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 ENTPD6O75354 484 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 PDE9AO76083 593 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 LRG1P02750 347 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 CTSCP53634 463 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SMIM11AP58511 58 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 CTAG1AP78358 180 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 TMEM115Q12893 351 aaPredicted RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 SPHARQ15513 63 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SSX1Q16384 188 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 GAREM2Q75VX8 874 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 RAB43Q86YS6 212 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 UBQLNLQ8IYU4 475 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 OR2A12Q8NGT7 310 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 WDR48Q8TAF3 677 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 ZNF480Q8WV37 535 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SCLYQ96I15 445 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 OPALINQ96PE5 141 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 TEFMQ96QE5 360 aaKnown RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 IL4I1Q96RQ9 567 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 OR51B5Q9H339 312 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 C11orf16Q9NQ32 467 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 C14orf119Q9NWQ9 140 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 RHCGQ9UBD6 479 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SSR3Q9UNL2 185 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 FAM172BPA6NC97 362 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 VSTM5A8MXK1 200 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NPC1O15118 1278 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 CAPN5O15484 640 aaPredicted RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 C1orf105O95561 183 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 KLK1P06870 262 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NPPBP16860 134 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 RCVRNP35243 200 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NNMTP40261 264 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 ILKQ13418 452 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 TP53BP2Q13625 1128 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 BCL7AQ4VC05 210 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 DCST1Q5T197 706 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 LHX8Q68G74 356 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NLGN4XQ8N0W4 816 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SLC39A11Q8N1S5 342 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NATD1Q8N6N6 113 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SLC5A11Q8WWX8 675 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 AUTS2Q8WXX7 1259 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 PPP1R16AQ96I34 528 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 RBM14Q96PK6 669 aaKnown RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 SLC25A19Q9HC21 320 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 HMX1Q9NP08 348 aaPredicted RBP8.28□□□□□ -1.08
PKP4-210ENST00000480171 FZD3Q9NPG1 666 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 AHSPQ9NZD4 102 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 KCND3Q9UK17 655 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 SLC6A14Q9UN76 642 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 STUB1Q9UNE7 303 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 PRELID1Q9Y255 219 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 TET1Q8NFU7 2136 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 KIAA1671Q9BY89 1806 aa8.28□□□□□ -1.08
PKP4-210ENST00000480171 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 H3BN98 237 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 FAAHO00519 579 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 IL3P08700 152 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 TIMP2P16035 220 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 ENDOUP21128 410 aaKnown RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 RPS19P39019 145 aaKnown RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 HTR3AP46098 478 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 GSTM5P46439 218 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 HTRA3P83110 453 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 TMEM201Q5SNT2 666 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 ZNF770Q6IQ21 691 aaPredicted RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 CEACAM20Q6UY09 585 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 ZNF517Q6ZMY9 492 aaPredicted RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.27□□□□□ -1.08
PKP4-210ENST00000480171 LILRA3Q8N6C8 439 aaPredicted RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 NKAIN3Q8N8D7 197 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 AP2M1Q96CW1 435 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 PDXPQ96GD0 296 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 SNX18Q96RF0 628 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 SDHCQ99643 169 aaPredicted RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 ZCCHC2Q9C0B9 1178 aaKnown RBP8.27□□□□□ -1.08
PKP4-210ENST00000480171 HHATLQ9HCP6 504 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.27□□□□□ -1.08
PKP4-210ENST00000480171 SNTG1Q9NSN8 517 aa8.27□□□□□ -1.08
PKP4-210ENST00000480171 DSPPQ9NZW4 1301 aa8.27□□□□□ -1.09
PKP4-210ENST00000480171 CENPXA8MT69 81 aa8.27□□□□□ -1.09
PKP4-210ENST00000480171 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
PKP4-210ENST00000480171 MYL12BO14950 172 aa8.27□□□□□ -1.09
PKP4-210ENST00000480171 OR10H3O60404 316 aa8.27□□□□□ -1.09
PKP4-210ENST00000480171 LEFTY1O75610 366 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms