RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SLC2A7Q6PXP3 512 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 COX15Q7KZN9 410 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 RIMKLAQ8IXN7 391 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 CCDC116Q8IYX3 515 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 CLECL1Q8IZS7 167 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 CLEC4FQ8N1N0 589 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 CPSF7Q8N684 471 aaKnown RBP6.05□□□□□ -1.44
HERC4-210ENST00000480158 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 ADCY4Q8NFM4 1077 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 MAGED4Q96JG8 741 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 PTCHD1Q96NR3 888 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 NPAS2Q99743 824 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 SCNM1Q9BWG6 230 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 FAIM2Q9BWQ8 316 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 CLMPQ9H6B4 373 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 WDR41Q9HAD4 459 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 LYRM4Q9HD34 91 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 SIRT5Q9NXA8 310 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 ASIC5Q9NY37 505 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 ZNF282Q9UDV7 671 aaPredicted RBP6.05□□□□□ -1.44
HERC4-210ENST00000480158 PHF11Q9UIL8 331 aa6.05□□□□□ -1.44
HERC4-210ENST00000480158 ZFHX4Q86UP3 3567 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 C1orf226A1L170 272 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 FAM234BA2RU67 622 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TRABD2BA6NFA1 517 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CCT8L1PA6NM43 557 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 A8MUA0 341 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 AIM2O14862 343 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CFLARO15519 480 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 BMP10O95393 424 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CPSF4O95639 269 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 PGRP06401 933 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 FHP07954 510 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 SNRPB2P08579 225 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 COX4I1P13073 169 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TCN2P20062 427 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 JAK1P23458 1154 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 KIR3DL1P43629 444 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ARFIP1P53367 373 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 RAB38P57729 211 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 RPS18P62269 152 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 DUSP2Q05923 314 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 GABPB1Q06547 395 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 STX4Q12846 297 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 HSPB3Q12988 150 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CYLC2Q14093 348 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 MPEG1Q2M385 716 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 YOD1Q5VVQ6 348 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 SLC48A1Q6P1K1 146 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 C6orf15Q6UXA7 325 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 ZNF551Q7Z340 670 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 STT3BQ8TCJ2 826 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TSLPQ969D9 159 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 MIEF2Q96C03 454 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 SPDL1Q96EA4 605 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 NAF1Q96HR8 494 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 DMRTB1Q96MA1 342 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 PRPF18Q99633 342 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 DUSP26Q9BV47 211 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 DDA1Q9BW61 102 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TRIM8Q9BZR9 551 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ANKRA2Q9H9E1 313 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 MS4A12Q9NXJ0 267 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ZIM2Q9NZV7 527 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 SLAMF8Q9P0V8 285 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 GPN3Q9UHW5 284 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 PADI1Q9ULC6 663 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 PCDHA9Q9Y5H5 950 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 SCN2AQ99250 2005 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CAPN14A8MX76 684 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TGFBR3LH3BV60 316 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 EBAG9O00559 213 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CLDN4O14493 209 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ANGPT2O15123 496 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 BRINP1O60477 761 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CNOT3O75175 753 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 NME6O75414 186 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 IFNA16P05015 189 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ZGLP1P0C6A0 271 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 DRD2P14416 443 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ACPPP15309 386 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ID4P47928 161 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ATP4BP51164 291 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 XKP51811 444 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 EFNA3P52797 238 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 CLNS1AP54105 237 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 CASP9P55211 416 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 TRA2BP62995 288 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 MXRA7P84157 204 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 RCAN2Q14206 197 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 PUM1Q14671 1186 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERC4-210ENST00000480158 NSDHLQ15738 373 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 PAGE3Q5JUK9 113 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ZNF385CQ66K41 422 aaPredicted RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 IKBIPQ70UQ0 350 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 SZRD1Q7Z422 152 aa6.04□□□□□ -1.44
HERC4-210ENST00000480158 ZC3H7AQ8IWR0 971 aaKnown RBP6.04□□□□□ -1.44
HERC4-210ENST00000480158 OR4K14Q8NGD5 310 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms