RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 FAM155AB1AL88 458 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 H7C417 338 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 P2RX6O15547 441 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 OR2T1O43869 369 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 STSP08842 583 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 PRSS3P35030 304 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 PGDP52209 483 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 ATXN1P54253 815 aaKnown RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 SELENOWP63302 87 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 CCINQ13939 588 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 MEF2DQ14814 521 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 C22orf39Q6P5X5 142 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 VASH1Q7L8A9 365 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR149Q86SP6 731 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 C12orf40Q86WS4 652 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 SYT14Q8NB59 555 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 BEST4Q8NFU0 473 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 OR4K14Q8NGD5 310 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 ASB13Q8WXK3 278 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 SNAPC3Q92966 411 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 EMID1Q96A84 441 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 MED30Q96HR3 178 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 EBPLQ9BY08 206 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 ARHGAP39Q9C0H5 1083 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 WRAP73Q9P2S5 460 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 NLKQ9UBE8 527 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 ERVK-19Q9WJR5 959 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 BACE2Q9Y5Z0 518 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 C3P01024 1663 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 A0A0G2JLL6 359 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 A0A0G2JMP0 313 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 RBMXL2O75526 392 aaKnown RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 M6PRP20645 277 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 PRKACGP22612 351 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 FSHRP23945 695 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 MLLT1Q03111 559 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 TMEM69Q5SWH9 247 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 CBLL1Q75N03 491 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 PRRT2Q7Z6L0 340 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 NRROSQ86YC3 692 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 GTPBP8Q8N3Z3 284 aaPredicted RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 OR4M2Q8NGB6 313 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 COQ8BQ96D53 544 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 MRGPRX2Q96LB1 330 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 DPEP3Q9H4B8 488 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 BRF2Q9HAW0 419 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 BIN3Q9NQY0 253 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 PDLIM7Q9NR12 457 aa5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 ZFR2Q9UPR6 939 aaKnown RBP5.9□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3DA0A087WVF3 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3IA0A087WXS9 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3EA0A087X179 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 WASHC1A8K0Z3 465 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3LB9A6J9 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 WASH3PC4AMC7 463 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR37L1O60883 481 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3HP0C7X1 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 STT3AP46977 705 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 HSD11B2P80365 405 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LRRC32Q14392 662 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 FGFBP1Q14512 234 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 AKIRIN2Q53H80 203 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PDSS1Q5T2R2 415 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3CQ6IPX1 549 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 WASH2PQ6VEQ5 465 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D3Q8IZP1 549 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SORT1Q99523 831 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CTRCQ99895 268 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MTHFD2LQ9H903 347 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 APMAPQ9HDC9 416 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ASIC5Q9NY37 505 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 DNAJC27Q9NZQ0 273 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 HIF3AQ9Y2N7 669 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PCDHB14Q9Y5E9 798 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PCDHGA8Q9Y5G5 932 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 COL2A1P02458 1487 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SMCO3A2RU48 225 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CRYZL1O95825 349 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OPN1SWP03999 348 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GJB1P08034 283 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 RNH1P13489 461 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PGAM2P15259 253 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TAL1P17542 331 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GPX3P22352 226 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GIPRP48546 466 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 RPS3AP61247 264 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CBFBQ13951 182 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF101Q8IZC7 436 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 NFKBIDQ8NI38 313 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LPPQ93052 612 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MSANTD3Q96H12 275 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZBED3Q96IU2 234 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ANKRD19PQ9H560 264 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ELAC1Q9H777 363 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 FBRSQ9HAH7 460 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PLCXD1Q9NUJ7 323 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ASB6Q9NWX5 421 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms