RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PITHD1Q9GZP4 211 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 CHRNA10Q9GZZ6 450 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 DRC3Q9H069 523 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 POLR1BQ9H9Y6 1135 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PELI2Q9HAT8 420 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SLC39A1Q9NY26 324 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 UBAP1Q9NZ09 502 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SEMA5BQ9P283 1151 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 STX18Q9P2W9 335 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 COPG2Q9UBF2 871 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SERTAD3Q9UJW9 196 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RARRES3Q9UL19 164 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PLCL2Q9UPR0 1127 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 BTRCQ9Y297 605 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PLLPQ9Y342 182 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 NEUROG3Q9Y4Z2 214 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PCDHGA8Q9Y5G5 932 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 KLK4Q9Y5K2 254 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 GVINP1Q7Z2Y8 2422 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 DNAH14Q0VDD8 3507 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FRYLO94915 3013 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 COL27A1Q8IZC6 1860 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF292O60281 2723 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FAM149AA5PLN7 773 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 URADA6NGE7 173 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 E7EQ34 232 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ACOT7O00154 380 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SLC22A1O15245 554 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 TAPBPO15533 448 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SRPX2O60687 465 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-209ENST00000479532 UGDHO60701 494 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 TRIM13O60858 407 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CRCPO75575 148 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINB7O75635 380 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SUPT7LO94864 414 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SCGB1D2O95969 90 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 OTCP00480 354 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 HBQ1P09105 142 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 EBLN1P0CF75 366 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 C1GALT1C1LP0DN25 315 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CDH1P12830 882 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 MTHFD2P13995 350 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 PVRP15151 417 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NPPBP16860 134 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 IMPDH1P20839 514 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CD40P25942 277 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CD82P27701 267 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 GSTM2P28161 218 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINB1P30740 379 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SDHAP31040 664 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 GDF5P43026 501 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 KCNC1P48547 511 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 AGTR2P50052 363 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 PDX1P52945 283 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SLC18A1P54219 525 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ITGA1P56199 1179 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CLDN6P56747 220 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SCAND1P57086 179 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 DNAJB13P59910 316 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ERVFRD-1P60508 538 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 KCNJ2P63252 427 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 MC2RQ01718 297 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 IRF8Q02556 426 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 RELAQ04206 551 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SLC34A1Q06495 639 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 C16orf72Q14CZ0 275 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NDUFA9Q16795 377 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 XKR6Q5GH73 641 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CATSPEREQ5SY80 951 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FAM91A1Q658Y4 838 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ATG9BQ674R7 924 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FAAH2Q6GMR7 532 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CDHR3Q6ZTQ4 885 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SH2D5Q6ZV89 423 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 RNF44Q7L0R7 432 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NANOGNBQ7Z5D8 188 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 SPATA24Q86W54 205 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CMIPQ8IY22 773 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ZZZ3Q8IYH5 903 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ARHGAP24Q8N264 748 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 CCNYL1Q8N7R7 359 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ANKRD42Q8N9B4 389 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ABHD11Q8NFV4 315 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FLVCR1-AS1Q8TAF5 88 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NEIL2Q969S2 332 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 L3HYPDHQ96EM0 354 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 PTCD3Q96EY7 689 aaKnown RBP5.88□□□□□ -1.47
SF3B1-209ENST00000479532 PRAP1Q96NZ9 151 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FCRL4Q96PJ5 515 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 OR6C1Q96RD1 312 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 TAAR9Q96RI9 348 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NRTNQ99748 197 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 EFCAB11Q9BUY7 163 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 DDA1Q9BW61 102 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 B3GNT4Q9C0J1 378 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 TWSG1Q9GZX9 223 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 EHD1Q9H4M9 534 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms