RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 FAM76AQ8TAV0 307 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 METTL21AQ8WXB1 218 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 DNASE2BQ8WZ79 361 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 PIK3R3Q92569 461 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SEPT8Q92599 483 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 CENPTQ96BT3 561 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 FBXO17Q96EF6 278 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 FUT8Q9BYC5 575 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 TMEM206Q9H813 350 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SLC38A10Q9HBR0 1119 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 ZNF71Q9NQZ8 489 aaPredicted RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 ILVBLA1L0T0 632 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RSPH10B2B2RC85 870 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 PRR23D1E9PI22 279 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 NPIPA3F8WFD2 350 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 EXTL3O43909 919 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 TRMUO75648 421 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 CDC123O75794 336 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 DDHD2O94830 711 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 VTNP04004 478 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RETP07949 1114 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RSPH10BP0C881 870 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 PRR23D2P0DMB1 279 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 EEF2P13639 858 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 GNB3P16520 340 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 ANP32AP39687 249 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 IER3P46695 156 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
RFC4-212ENST00000479307 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 TTC27Q6P3X3 843 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 TMEM207Q6UWW9 146 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 MEX3DQ86XN8 651 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 SIAH3Q8IW03 269 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 TUSC5Q8IXB3 177 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 APCDD1Q8J025 514 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 NUP93Q8N1F7 819 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 PRSS35Q8N3Z0 413 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 UXS1Q8NBZ7 420 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 OR1L3Q8NH93 324 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 CTCFLQ8NI51 663 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 ZNF501Q96CX3 271 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 LGALS12Q96DT0 336 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 DUX3Q96PT4 197 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 BTBD9Q96Q07 612 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 NDNQ99608 321 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 LPAR4Q99677 370 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 DESI2Q9BSY9 194 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 LSG1Q9H089 658 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 THAP2Q9H0W7 228 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 UBQLN3Q9H347 655 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RIMS4Q9H426 269 aaPredicted RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 RNF121Q9H920 327 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RAVER2Q9HCJ3 691 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 SEPT10Q9P0V9 454 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 IL36AQ9UHA7 158 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 RUVBL2Q9Y230 463 aaKnown RBP4.38□□□□□ -1.71
RFC4-212ENST00000479307 KIAA1217Q5T5P2 1943 aa4.38□□□□□ -1.71
RFC4-212ENST00000479307 A0A0B4J203 849 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 KHDRBS3O75525 346 aaKnown RBP4.37□□□□□ -1.71
RFC4-212ENST00000479307 ATP1B1P05026 303 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 HMBSP08397 361 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 CD48P09326 243 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 CD59P13987 128 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 NPBWR1P48145 328 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 DNA2P51530 1060 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 SNU13P55769 128 aaKnown RBP4.37□□□□□ -1.71
RFC4-212ENST00000479307 ST8SIA6P61647 398 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 TIMM10P62072 90 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 DYNLL1P63167 89 aaKnown RBP4.37□□□□□ -1.71
RFC4-212ENST00000479307 ASIC1P78348 528 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 SGCGQ13326 291 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 TRIM29Q14134 588 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 NFE2L1Q14494 772 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 FUT11Q495W5 492 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 GLRA4Q5JXX5 417 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 CCDC91Q7Z6B0 441 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 SERINC5Q86VE9 423 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 FAM9BQ8IZU0 186 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 OR5AP2Q8NGF4 316 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 OR10G8Q8NGN5 311 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 UBLCP1Q8WVY7 318 aaPredicted RBP4.37□□□□□ -1.71
RFC4-212ENST00000479307 CKAP2Q8WWK9 683 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 CASP10Q92851 521 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 SNRNP40Q96DI7 357 aaKnown RBP4.37□□□□□ -1.71
RFC4-212ENST00000479307 SGF29Q96ES7 293 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 KLHL5Q96PQ7 755 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 ATG101Q9BSB4 218 aa4.37□□□□□ -1.71
RFC4-212ENST00000479307 PRMT8Q9NR22 394 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms