RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 CPNE6O95741 557 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 KLK1P06870 262 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 GP1BAP07359 652 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ANXA4P09525 319 aaPredicted RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 ZNF888P0CJ79 500 aaPredicted RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 COX4I1P13073 169 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 NELFEP18615 380 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 CAPN3P20807 821 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CD247P20963 164 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CALB2P22676 271 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 SSR2P43308 183 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ASMTP46597 345 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PLA2G16P53816 162 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CLNS1AP54105 237 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 CLDN8P56748 225 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PCBP3P57721 371 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 VSX2P58304 361 aaPredicted RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 C21orf58P58505 322 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 NCALDP61601 193 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 STXBP1P61764 594 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 UFM1P61960 85 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 HSD11B2P80365 405 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ZNF763Q0D2J5 394 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 RPS6KA2Q15349 733 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 MAPRE2Q15555 327 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 KIF26BQ2KJY2 2108 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 HKDC1Q2TB90 917 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 AASDHQ4L235 1098 aaPredicted RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 ZC3H12BQ5HYM0 836 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 TMEM71Q6P5X7 295 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ABHD17CQ6PCB6 329 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ZNF793Q6ZN11 406 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 IKBIPQ70UQ0 350 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ZNF771Q7L3S4 317 aaPredicted RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 PAGE2Q7Z2X7 111 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 DGLUCYQ7Z3D6 616 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 RIMKLAQ8IXN7 391 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 FAM9CQ8IZT9 166 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ZCCHC7Q8N3Z6 543 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 KRTCAP2Q8N6L1 136 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CAMKVQ8NCB2 501 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ADCY4Q8NFM4 1077 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CLHC1Q8NHS4 586 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP48-208ENST00000479177 ZCCHC10Q8TBK6 192 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PROKR1Q8TCW9 393 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 UTP15Q8TED0 518 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 RGMAQ96B86 450 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CMTM5Q96DZ9 223 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 NSL1Q96IY1 281 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 QRFPRQ96P65 431 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 KCNC2Q96PR1 638 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 C17orf62Q9BQA9 187 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 SLC25A23Q9BV35 468 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 ZNF768Q9H5H4 540 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 CLMPQ9H6B4 373 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 SYNDIG1Q9H7V2 258 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 DDX31Q9H8H2 851 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 PDE7BQ9NP56 450 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 SLC52A3Q9NQ40 469 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 AHSPQ9NZD4 102 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 CCDC167Q9P0B6 97 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 BAIAP2L1Q9UHR4 511 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 PLCL2Q9UPR0 1127 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 MRPS2Q9Y399 296 aaKnown RBP6.3□□□□□ -1.4
USP48-208ENST00000479177 DMXL1Q9Y485 3027 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 SCN3AQ9NY46 2000 aa6.3□□□□□ -1.4
USP48-208ENST00000479177 IGHV5-10-1A0A0J9YXX1 117 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 GNG14A0A1W2PPG7 69 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 ASPDHA6ND91 283 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 URADA6NGE7 173 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 C4orf47A7E2U8 309 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 BBIP1A8MTZ0 92 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 PROB1E7EW31 1015 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 H3BMH7 237 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 FBP2O00757 339 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 SCAMP2O15127 329 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 ZSCAN9O15535 394 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 SRPX2O60687 465 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 HNRNPCL1O60812 293 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 GBAP04062 536 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 EIF2S1P05198 315 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 IL3P08700 152 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SMIM10L1P0DMW3 83 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 PRPS1L1P21108 318 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 HIST1H1TP22492 207 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 ATP5A1P25705 553 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 CERS1P27544 350 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 HPCAL1P37235 193 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms